ANPrAod: Identify Antioxidant Proteins by Fusing Amino Acid Clustering Strategy and N -Peptide Combination. - Qilemuge Xi; Hao Wang 109; Liuxi Yi; Jian Zhou; Yuchao Liang; Xiaoqing Zhao; Yongchun Zuo (Comput. Math. Methods Medicine, 2021)

EmAtlas: a comprehensive atlas for exploring spatiotemporal activation in mammalian embryogenesis. - Lei Zheng; Pengfei Liang; Chunshen Long; Haicheng Li; Hanshuang Li; Yuchao Liang; Xiang He; Qilemuge Xi; Yongqiang Xing; Yongchun Zuo (Nucleic Acids Res., 2023)

A comprehensive review of bioinformatics tools for chromatin loop calling. - Li Liu; Kaiyuan Han; Huimin Sun; Lu Han; Dong Gao 002; Qilemuge Xi; Lirong Zhang; Hao Lin 001 (Briefings Bioinform., 2023)

A computational framework of routine test data for the cost-effective chronic disease prediction. - Mingzhu Liu; Jian Zhou; Qilemuge Xi; Yuchao Liang; Haicheng Li; Pengfei Liang; Yuting Guo; Ming Liu; Temuqile Temuqile; Lei Yang; Yongchun Zuo (Briefings Bioinform., 2023)

Integrating somatic mutation profiles with structural deep clustering network for metabolic stratification in pancreatic cancer: a comprehensive analysis of prognostic and genomic landscapes. - Min Zou; Honghao Li; Dongqing Su; Yuqiang Xiong; Haodong Wei; Shiyuan Wang; Hongmei Sun; Tao Wang; Qilemuge Xi; Yongchun Zuo; Lei Yang (Briefings Bioinform., 2023)

Recent advances in deep learning for protein-protein interaction: a review. - Jiafu Cui; Siqi Yang; Litai Yi; Qilemuge Xi; Dezhi Yang; Yongchun Zuo (BioData Min., 2025)

Refining cell subpopulation identification and cell fate mapping using cell energy. - Chunshen Long; Hanshuang Li; Zhifang Li; Jia Zhang; Qilemuge Xi; Yongchun Zuo (Expert Syst. Appl., 2026)