miR2Disease: a manually curated database for microRNA deregulation in human disease. - Qinghua Jiang; Yadong Wang 001; Yangyang Hao; Liran Juan; Mingxiang Teng; Xinjun Zhang; Meimei Li; Guohua Wang; Yunlong Liu (Nucleic Acids Res., 2009)

Predicting human microRNA-disease associations based on support vector machine. - Qinghua Jiang; Guohua Wang; Tianjiao Zhang; Yadong Wang (BIBM, 2010)

Weighted Network-Based Inference of Human MicroRNA-Disease Associations. - Qinghua Jiang; Yangyang Hao; Guohua Wang; Tianjiao Zhang; Yadong Wang (FCST, 2010)

Prioritization of disease microRNAs through a human phenome-microRNAome network. - Qinghua Jiang; Yangyang Hao; Guohua Wang; Liran Juan; Tianjiao Zhang; Mingxiang Teng; Yunlong Liu; Yadong Wang 001 (BMC Syst. Biol., 2010)

Design, Fabrication, and Testing of a Bulk Micromachined Inertial Measurement Unit. - Honglong Chang; Qiang Shen; Zhiguang Zhou; Jianbing Xie; Qinghua Jiang; Weizheng Yuan (Sensors, 2010)

Predicting human microRNA-disease associations based on support vector machine. - Qinghua Jiang; Guohua Wang; Shuilin Jin; Yu Li; Yadong Wang (Int. J. Data Min. Bioinform., 2013)

Continuous but non-smooth adaptive observer of a class of nonlinear systems. - Yanjun Shen; Qinghua Jiang; Peng Miao (ICSAI, 2014)

An integrative approach for measuring semantic similarities using gene ontology. - Jiajie Peng; Hongxiang Li; Qinghua Jiang; Yadong Wang 001; Jin Chen 004 (BMC Syst. Biol., 2014)

misFinder: identify mis-assemblies in an unbiased manner using reference and paired-end reads. - Xiao Zhu; Henry C. M. Leung; Rongjie Wang; Francis Y. L. Chin; Siu-Ming Yiu; Guangri Quan; Yajie Li; Rui Zhang; Qinghua Jiang; Bo Liu 023; Yucui Dong; Guohui Zhou; et al. (BMC Bioinform., 2015)

LncRNA2Target: a database for differentially expressed genes after lncRNA knockdown or overexpression. - Qinghua Jiang; Jixuan Wang; Xiaoliang Wu; Rui Ma; Tianjiao Zhang; Shuilin Jin; Zhijie Han 002; Renjie Tan; Jiajie Peng; Guiyou Liu; Yu Li; Yadong Wang 001 (Nucleic Acids Res., 2015)

InfDisSim: A novel method for measuring disease similarity based on information flow. - Yang Hu 008; Meng Zhou 003; Hongbo Shi; Hong Ju; Qinghua Jiang; Liang Cheng 006 (BIBM, 2016)

ERDS-pe: A paired hidden Markov model for copy number variant detection from whole-exome sequencing data. - Renjie Tan; Jixuan Wang; Xiaoliang Wu; Guoqiang Wan; Rongjie Wang; Rui Ma; Zhijie Han 002; Wenyang Zhou; Shuilin Jin; Qinghua Jiang; Yadong Wang 001 (BIBM, 2016)

Preface. - Yadong Wang; Kevin Burrage; Yunlong Liu; Shinichi Morishita; Tianhai Tian; Qinghua Jiang; Jiangning Song; Guohua Wang; Qian Zhu; Xiaohua Tony Hu (BIBM, 2016)

GED: a manually curated comprehensive resource for epigenetic modification of gametogenesis. - Weiyang Bai; Wen Yang; Wenjing Wang; Yang Wang; Can Liu; Qinghua Jiang; Jinlian Hua; Mingzhi Liao (Briefings Bioinform., 2017)

DTWscore: differential expression and cell clustering analysis for time-series single-cell RNA-seq data. - Zhuo Wang; Shuilin Jin; Guiyou Liu; Xiurui Zhang; Nan Wang; Deliang Wu; Yang Hu 008; Chiping Zhang; Qinghua Jiang; Li Xu; Yadong Wang 001 (BMC Bioinform., 2017)

ProbPFP: A Multiple Sequence Alignment Algorithm Combining Partition Function and Hidden Markov Model with Particle Swarm Optimization. - Qing Zhan; Nan Wang; Shuilin Jin; Renjie Tan; Qinghua Jiang; Yadong Wang (BIBM, 2018)

BIN1 rs744373 Variant Is Significantly Associated with Alzheimer's Disease in Caucasian but Not East Asian Populations. - Zhifa Han; Tao Wang; Rui Tian; Wenyang Zhou; Pingping Wang; Peng Ren; Jian Zong; Yang Hu 008; Shuilin Jin; Qinghua Jiang (ICIC (1), 2018)

CircR2Disease: a manually curated database for experimentally supported circular RNAs associated with various diseases. - Chunyan Fan; Xiujuan Lei; Zengqiang Fang; Qinghua Jiang; Fang-Xiang Wu (Database J. Biol. Databases Curation, 2018)

DincRNA: a comprehensive web-based bioinformatics toolkit for exploring disease associations and ncRNA function. - Liang Cheng 006; Yang Hu 008; Jie Sun 021; Meng Zhou 003; Qinghua Jiang (Bioinform., 2018)

EWAS: epigenome-wide association study software 2.0. - Jing Xu; Linna Zhao; Di Liu; Simeng Hu; Xiuling Song; Jin Li; Hongchao Lv; Lian Duan; Mingming Zhang; Qinghua Jiang; Guiyou Liu; Shuilin Jin; et al. (Bioinform., 2018)

Disease status affects the association between rs4813620 and the expression of Alzheimer's disease susceptibility gene TRIB3. - Guiyou Liu; Shuilin Jin; Yang Hu 008; Qinghua Jiang (Proc. Natl. Acad. Sci. USA, 2018)

A learning-based framework for miRNA-disease association identification using neural networks. - Jiajie Peng; Weiwei Hui; Qianqian Li; Bolin Chen; Jianye Hao; Qinghua Jiang; Xuequn Shang 001; Zhongyu Wei (Bioinform., 2019)

BIN1 rs744373 variant shows different association with Alzheimer's disease in Caucasian and Asian populations. - Zhifa Han; Tao Wang; Rui Tian; Wenyang Zhou; Pingping Wang; Peng Ren; Jian Zong; Yang Hu 008; Shuilin Jin; Qinghua Jiang (BMC Bioinform., 2019)

ProbPFP: a multiple sequence alignment algorithm combining hidden Markov model optimized by particle swarm optimization with partition function. - Qing Zhan; Nan Wang; Shuilin Jin; Renjie Tan; Qinghua Jiang; Yadong Wang (BMC Bioinform., 2019)

LncRNA2Target v2.0: a comprehensive database for target genes of lncRNAs in human and mouse. - Liang Cheng 006; Pingping Wang; Rui Tian; Song Wang; Qinghua Guo; Meng Luo 001; Wenyang Zhou; Guiyou Liu; Huijie Jiang; Qinghua Jiang (Nucleic Acids Res., 2019)

Morbigenous brain region and gene detection with a genetically evolved random neural network cluster approach in late mild cognitive impairment. - Xia-an Bi; Yingchao Liu; Yiming Xie; Xi Hu; Qinghua Jiang (Bioinform., 2020)

ERDS-Exome: A Hybrid Approach for Copy Number Variant Detection from Whole-Exome Sequencing Data. - Renjie Tan; Jixuan Wang; Xiaoliang Wu; Liran Juan; Tianjiao Zhang; Rui Ma; Qing Zhan; Tao Wang; Shuilin Jin; Qinghua Jiang; Yadong Wang (IEEE ACM Trans. Comput. Biol. Bioinform., 2020)

Precision Clock Synchronization Method for Towed Line Array Sonar. - Guofei Lv; Qinghua Jiang; Dongdong Wang (ICSPCC, 2021)

Comprehensive analysis of partial methylation domains in colorectal cancer based on single-cell methylation profiles. - Yan Huang; Pingping Wang; Wenyang Zhou; Meng Luo 001; Zhaochun Xu; Rui Cheng 003; Chang Xu; Xiyun Jin; Yiqun Li; Qinghua Jiang (Briefings Bioinform., 2021)

Global characterization of B cell receptor repertoire in COVID-19 patients by single-cell V(D)J sequencing. - Xiyun Jin; Wenyang Zhou; Meng Luo 001; Pingping Wang; Zhaochun Xu; Kexin Ma 003; Huimin Cao; Chang Xu; Yan Huang; Rui Cheng 003; Lixing Xiao; Xiaoyu Lin; et al. (Briefings Bioinform., 2021)

DLpTCR: an ensemble deep learning framework for predicting immunogenic peptide recognized by T cell receptor. - Zhaochun Xu; Meng Luo 001; Weizhong Lin; Guangfu Xue; Pingping Wang; Xiyun Jin; Chang Xu; Wenyang Zhou; Yideng Cai; Wenyi Yang; Huan Nie; Qinghua Jiang (Briefings Bioinform., 2021)

Identification of sub-Golgi protein localization by use of deep representation learning features. - Zhibin Lv; Pingping Wang; Quan Zou 001; Qinghua Jiang (Bioinform., 2021)

Identification of alternative splicing-derived cancer neoantigens for mRNA vaccine development. - Rui Cheng 003; Zhaochun Xu; Meng Luo 001; Pingping Wang; Huimin Cao; Xiyun Jin; Wenyang Zhou; Lixing Xiao; Qinghua Jiang (Briefings Bioinform., 2022)

CBLRR: a cauchy-based bounded constraint low-rank representation method to cluster single-cell RNA-seq data. - Qian Ding; Wenyi Yang; Meng Luo 001; Chang Xu; Zhaochun Xu; Fenglan Pang; Yideng Cai; Anastasia A. Anashkina; Xi Su; Na Chen; Qinghua Jiang (Briefings Bioinform., 2022)

Impact of mutations in SARS-COV-2 spike on viral infectivity and antigenicity. - Wenyang Zhou; Chang Xu; Pingping Wang; Anastasia A. Anashkina; Qinghua Jiang (Briefings Bioinform., 2022)

Overview of structural variation calling: Simulation, identification, and visualization. - Yu Lei; Yue Meng; Xinqi Guo; Ke Ning; Yixin Bian; Lanlan Li; Zhenduo Hu; Anastasia A. Anashkina; Qinghua Jiang; Yucui Dong; Xiao Zhu (Comput. Biol. Medicine, 2022)

Network analysis between neuron dysfunction and neuroimmune response based on neural single-cell transcriptome of COVID-19 patients. - Xiaoyu Lin; Huan Nie; Ran Tang; Pingping Wang; Xiyun Jin; Qinghua Jiang; Fang Han; Na Chen; Yu Li (Comput. Biol. Medicine, 2022)

MutCov: A pipeline for evaluating the effect of mutations in spike protein on infectivity and antigenicity of SARS-CoV-2. - Wenyang Zhou; Chang Xu; Meng Luo 001; Pingping Wang; Zhaochun Xu; Guangfu Xue; Xiyun Jin; Yan Huang; Yiqun Li; Huan Nie; Qinghua Jiang; Anastasia A. Anashkina (Comput. Biol. Medicine, 2022)

An efficient multilayer RBF neural network and its application to regression problems. - Qinghua Jiang; Lailai Zhu; Chang Shu 002; Vinothkumar Sekar (Neural Comput. Appl., 2022)

An Integrated Calibration Scheme for Attitude Benchmark of Micro-nano Satellites and Its Experiments Based on In-Orbit Data. - Mingqun Li; Tong Luo; Shaokai Wang; He Li; Yongjun Lei; Qinghua Jiang (CACRE, 2023)

Research on Satellite Attitude Control Scheme with High Precision Pointing of Astronomical Target and Its Application in Orbit. - Mingqun Li; Xiang Liu; Gaojian Lyu; Qinghua Jiang; Yong Wang (ICSCC, 2023)

Integrated smart analytics of nucleic acid amplification tests via paper microfluidics and deep learning in cloud computing. - Hao Sun; Qinghua Jiang; Yi Huang; Jin Mo; Wantao Xie; Hui Dong; Yuan Jia (Biomed. Signal Process. Control., 2023)

Single-cell transcriptomics reveals the interaction between peripheral CD4+ CTLs and mesencephalic endothelial cells mediated by IFNG in Parkinson's disease. - Shi Yan; Yao Si; Wenyang Zhou; Rui Cheng 003; Pingping Wang; Di Wang; Wencai Ding; Wanying Shi; Qinghua Jiang; Fan Yang; Lifen Yao (Comput. Biol. Medicine, 2023)

An interpretable single-cell RNA sequencing data clustering method based on latent Dirichlet allocation. - Qi Yang; Zhaochun Xu; Wenyang Zhou; Pingping Wang; Qinghua Jiang; Liran Juan (Briefings Bioinform., 2023)

DeepCCI: a deep learning framework for identifying cell-cell interactions from single-cell RNA sequencing data. - Wenyi Yang; Pingping Wang; Meng Luo 001; Yideng Cai; Chang Xu; Guangfu Xue; Xiyun Jin; Rui Cheng 003; Jinhao Que; Fenglan Pang; Yuexin Yang; Huan Nie; et al. (Bioinform., 2023)

TriCLFF: a multi-modal feature fusion framework using contrastive learning for spatial domain identification. - Fenglan Pang; Guangfu Xue; Wenyi Yang; Yideng Cai; Jinhao Que; Haoxiu Sun; Pingping Wang; Shuaiyu Su; Xiyun Jin; Qian Ding; Zuxiang Wang; Meng Luo 001; et al. (Briefings Bioinform., 2025)

Fault Diagnosis and Prediction of mechanical parts based on Deep Learning. - Qinghua Jiang; Xiangdong Bo (Mechatron. Syst. Control., 2025)