A novel computational framework for simultaneous integration of multiple types of genomic data to identify microRNA-gene regulatory modules. - Shi-Hua Zhang; Qingjiao Li; Juan Liu 007; Xianghong Jasmine Zhou (Bioinform., 2011)

Predicting linear B-cell epitopes by using sequence-derived structural and physicochemical features. - Wen Zhang 008; Juan Liu 007; Meng Zhao; Qingjiao Li (Int. J. Data Min. Bioinform., 2012)

Hi-Corrector: a fast, scalable and memory-efficient package for normalizing large-scale Hi-C data. - Wenyuan Li 006; Ke Gong; Qingjiao Li; Frank Alber; Xianghong Jasmine Zhou (Bioinform., 2015)

CTRhythm: Accurate Atrial Fibrillation Detection from Single-Lead ECG by Convolutional Neural Network and Transformer Integration. - Zhanyu Liang; Chen Yang; Zhengyang Yu; Yinmingren Fu; Bozhen Ren; Maohuan Lin; Qingjiao Li; Xuemei Liu; Yangxin Chen; Li C. Xia (BIBM, 2024)

Hierarchical learning of gastric cancer molecular subtypes by integrating multi-modal DNA-level omics data and clinical stratification. - Binyu Yang; Siying Liu; Jiemin Xie; Xi Tang; Pan Guan; Yifan Zhu; Xuemei Liu; Yunhui Xiong; Zuli Yang; Weiyao Li; Yonghua Wang; Wen Chen; et al. (Quant. Biol., 2024)