MiRNAs as promising phylogenetic markers for inferring deep metazoan phylogeny and in support of Olfactores hypothesis. - Qingqing Cai; Xiaoyan Zhang; Zuofeng Li (BIBM, 2010)

Dr.VIS: a database of human disease-related viral integration sites. - Xin Zhao; Qi Liu 019; Qingqing Cai; Yanyun Li; Congjian Xu; Yixue Li; Zuofeng Li; Xiaoyan Zhang (Nucleic Acids Res., 2012)

Large-scale Semantic Parsing via Schema Matching and Lexicon Extension. - Qingqing Cai; Alexander Yates (ACL (1), 2013)

Semantic Parsing Freebase: Towards Open-domain Semantic Parsing. - Qingqing Cai; Alexander Yates (*SEM@NAACL-HLT, 2013)

Word Substitution in Short Answer Extraction: A WordNet-based Approach. - Qingqing Cai; James Gung; Maochen Guan; Gerald Kurlandski; Adam Pease (GWC, 2016)

DGT: A contribution-aware differential gradient transmission mechanism for distributed machine learning. - Huaman Zhou; Zonghang Li; Qingqing Cai; Hongfang Yu; Shouxi Luo; Long Luo; Gang Sun 001 (Future Gener. Comput. Syst., 2021)

Joint Client Selection and Resource Allocation for Federated Learning in Mobile Edge Networks. - Long Luo; Qingqing Cai; Zonghang Li; Hongfang Yu (WCNC, 2022)

High Throughput Routing Path Selection for Payment Channel Network. - Qingqing Cai; Gang Sun 001; Hongfang Yu; Long Luo (ISCC, 2023)

Enhanced polygenic risk score incorporating gene-environment interaction suggests the association of major depressive disorder with cardiac and lung function. - Chuyu Pan; Bolun Cheng; Xiaoyue Qin; Shiqiang Cheng; Li Liu; Xuena Yang; Peilin Meng; Na Zhang; Dan He; Qingqing Cai; Wenming Wei; Jingni Hui; et al. (Briefings Bioinform., 2024)

Split-Chain-Based Efficient Blockchain-Assisted Cross-Domain Authentication for IoT. - Deyu Luo; Qingqing Cai; Gang Sun 001; Hongfang Yu; Dusit Niyato (IEEE Trans. Netw. Serv. Manag., 2024)

Deter-Pay: A Deterministic Routing Protocol in Concurrent Payment Channel Network. - Qingqing Cai; Jinghui Chen; Deyu Luo; Gang Sun 001; Hongfang Yu; Mohsen Guizani (IEEE Internet Things J., 2024)

CRP: A Cluster-Based Routing Protocol for Lightweight Nodes in Payment Channel Networks. - Jinghui Chen; Qingqing Cai; Gang Sun 001; Hongfang Yu; Dusit Niyato (IEEE Trans. Netw. Serv. Manag., 2025)