A Polynomial Time Solvable Formulation of Multiple Sequence Alignment. - Sing-Hoi Sze; Yue Lu; Qingwu Yang (J. Comput. Biol., 2006)

Path Matching and Graph Matching in Biological Networks. - Qingwu Yang; Sing-Hoi Sze (J. Comput. Biol., 2007)

Predicting protein folding pathways at the mesoscopic level based on native interactions between secondary structure elements. - Qingwu Yang; Sing-Hoi Sze (BMC Bioinform., 2008)

Finding conserved patterns in biological sequences, networks and genomes. - Qingwu Yang (2009)

Identifying Gene Clusters within Localized Regions in Multiple Genomes. - Qingwu Yang; Gangman Yi; Fenghui Zhang; Michael R. Thon; Sing-Hoi Sze (J. Comput. Biol., 2010)

Characterization of the binding profile of peptide to transporter associated with antigen processing (TAP) using Gaussian process regression. - Yonggang Ren; Bin Wu; Yuzhu Pan; Fenglin Lv 002; Xiangjun Kong; Xiaoli Luo; Yuanchao Li; Qingwu Yang (Comput. Biol. Medicine, 2011)