Explicit ion, implicit water solvation for molecular dynamics of nucleic acids and highly charged molecules. - Ninad V. Prabhu; Manoranjan Panda; Qingyi Yang; Kim A. Sharp (J. Comput. Chem., 2008)

Comprehensive Assessment of Torsional Strain in Crystal Structures of Small Molecules and Protein-Ligand Complexes using ab Initio Calculations. - Brajesh K. Rai; Vishnu Sresht; Qingyi Yang; Raymond J. Unwalla; Meihua Tu; Alan M. Mathiowetz; Gregory A. Bakken (J. Chem. Inf. Model., 2019)

Optimal designs for pairwise calculation: An application to free energy perturbation in minimizing prediction variability. - Qingyi Yang; Woodrow Burchett; Gregory S. Steeno; Shuai Liu; Mingjun Yang; David L. Mobley; Xinjun Hou (J. Comput. Chem., 2020)

TorsionNet: A Deep Neural Network to Rapidly Predict Small-Molecule Torsional Energy Profiles with the Accuracy of Quantum Mechanics. - Brajesh K. Rai; Vishnu Sresht; Qingyi Yang; Ray Unwalla; Meihua Tu; Alan M. Mathiowetz; Gregory A. Bakken (J. Chem. Inf. Model., 2022)

SE-DCFN: Semantic-Enhanced Dual Cross-modal Fusion Network for Depression Recognition. - Long Hu; Qingyi Yang; Rui Wang 077; Yixue Hao; Min Chen 003; Yijun Mo (BIBM, 2024)

CCFN: Depression Detection via Multimodal Fusion with Complex-valued Capsule Network. - Jierui Lei; Qingyi Yang; Bo Li; Wenjian Zhang (IJCNN, 2024)