A cost-driven compilation framework for speculative parallelization of sequential programs. - Zhao-Hui Du; Chu-Cheow Lim; Xiao-Feng Li; Chen Yang; Qingyu Zhao; Tin-Fook Ngai (PLDI, 2004)

Geometric-Feature-Based Spectral Graph Matching in Pharyngeal Surface Registration. - Qingyu Zhao; Stephen M. Pizer; Marc Niethammer; Julian G. Rosenman (MICCAI (1), 2014)

Local Metric Learning in 2D/3D Deformable Registration With Application in the Abdomen. - Qingyu Zhao; Chen-Rui Chou; Gig S. Mageras; Stephen M. Pizer (IEEE Trans. Medical Imaging, 2014)

Surface Registration in the Presence of Missing Patches and Topology Change. - Qingyu Zhao; James Price; Stephen M. Pizer; Marc Niethammer; Ron Alterovitz; Julian G. Rosenman (MIUA, 2015)

The Endoscopogram: A 3D Model Reconstructed from Endoscopic Video Frames. - Qingyu Zhao; True Price; Stephen M. Pizer; Marc Niethammer; Ron Alterovitz; Julian G. Rosenman (MICCAI (1), 2016)

Orthotropic Thin Shell Elasticity Estimation for Surface Registration. - Qingyu Zhao; Stephen M. Pizer; Ron Alterovitz; Marc Niethammer; Julian G. Rosenman (IPMI, 2017)

Improving 3D surface reconstruction from endoscopic video via fusion and refined reflectance modeling. - Rui Wang 071; True Price; Qingyu Zhao; Jan-Michael Frahm; Julian G. Rosenman; Stephen M. Pizer (Image Processing, 2017)

Surface Registration for Pharyngeal Radiation Treatment Planning. - Qingyu Zhao (2017)

A Riemannian Framework for Longitudinal Analysis of Resting-State Functional Connectivity. - Qingyu Zhao; Dongjin Kwon; Kilian M. Pohl (MICCAI (3), 2018)

Skeleton-based Generalized Cylinder Deformation under the Relative Curvature Condition. - Ruibin Ma; Qingyu Zhao; Rui Wang 071; James N. Damon; Julian G. Rosenman; Stephen M. Pizer (PG (Short Papers and Posters), 2018)

Deforming generalized cylinders without self-intersection by means of a parametric center curve. - Ruibin Ma; Qingyu Zhao; Rui Wang 071; James N. Damon; Julian G. Rosenman; Stephen M. Pizer (Comput. Vis. Media, 2018)

Chained regularization for identifying brain patterns specific to HIV infection. - Ehsan Adeli 001; Dongjin Kwon; Qingyu Zhao; Adolf Pfefferbaum; Natalie M. Zahr; Edith V. Sullivan; Kilian M. Pohl (NeuroImage, 2018)

Variational Autoencoder with Truncated Mixture of Gaussians for Functional Connectivity Analysis. - Qingyu Zhao; Nicolas Honnorat; Ehsan Adeli 001; Adolf Pfefferbaum; Edith V. Sullivan; Kilian M. Pohl (IPMI, 2019)

Prediction of Treatment Outcome for Autism from Structure of the Brain Based On Sure Independence Screening. - Juntang Zhuang; Nicha C. Dvornek; Qingyu Zhao; Xiaoxiao Li; Pamela Ventola; James S. Duncan (ISBI, 2019)

Covariance Shrinkage for Dynamic Functional Connectivity. - Nicolas Honnorat; Ehsan Adeli 001; Qingyu Zhao; Adolf Pfefferbaum; Edith V. Sullivan; Kilian M. Pohl (CNI@MICCAI, 2019)

Data Augmentation Based on Substituting Regional MRIs Volume Scores. - Tuo Leng; Qingyu Zhao; Chao Yang; Zhufu Lu; Ehsan Adeli 001; Kilian M. Pohl (LABELS/HAL-MICCAI/CuRIOUS@MICCAI, 2019)

Variational AutoEncoder for Regression: Application to Brain Aging Analysis. - Qingyu Zhao; Ehsan Adeli 001; Nicolas Honnorat; Tuo Leng; Kilian M. Pohl (MICCAI (2), 2019)

Confounder-Aware Visualization of ConvNets. - Qingyu Zhao; Ehsan Adeli 001; Adolf Pfefferbaum; Edith V. Sullivan; Kilian M. Pohl (MLMI@MICCAI, 2019)

Multiple Object Tracking Based on the Deep Neural Networks and Correlation Filter. - Qingyu Zhao; Lu Wang; Zefan Zhou (ROBIO, 2019)

Variational Autoencoder with Truncated Mixture of Gaussians for Functional Connectivity Analysis. - Qingyu Zhao; Nicolas Honnorat; Ehsan Adeli 001; Kilian M. Pohl (CoRR, 2019)

Bias-Resilient Neural Network. - Ehsan Adeli 001; Qingyu Zhao; Adolf Pfefferbaum; Edith V. Sullivan; Li Fei-Fei 001; Juan Carlos Niebles; Kilian M. Pohl (CoRR, 2019)

Inpainting Cropped Diffusion MRI Using Deep Generative Models. - Rafi Ayub; Qingyu Zhao; M. J. Meloy; Edith V. Sullivan; Adolf Pfefferbaum; Ehsan Adeli 001; Kilian M. Pohl (PRIME@MICCAI, 2020)

Spatio-Temporal Graph Convolution for Resting-State fMRI Analysis. - Soham Gadgil; Qingyu Zhao; Adolf Pfefferbaum; Edith V. Sullivan; Ehsan Adeli 001; Kilian M. Pohl (MICCAI (7), 2020)

Spatio-Temporal Graph Convolution for Functional MRI Analysis. - Soham Gadgil; Qingyu Zhao; Ehsan Adeli 001; Adolf Pfefferbaum; Edith V. Sullivan; Kilian M. Pohl (CoRR, 2020)

Recurrent Neural Networks with Longitudinal Pooling and Consistency Regularization. - Jiahong Ouyang; Qingyu Zhao; Edith V. Sullivan; Adolf Pfefferbaum; Susan F. Tapert; Ehsan Adeli 001; Kilian M. Pohl (CoRR, 2020)

LSSL: Longitudinal Self-Supervised Learning. - Qingyu Zhao; Zixuan Liu 001; Ehsan Adeli 001; Kilian M. Pohl (CoRR, 2020)

Deep learning identifies morphological determinants of sex differences in the pre-adolescent brain. - Ehsan Adeli 001; Qingyu Zhao; Natalie M. Zahr; Aimee Goldstone; Adolf Pfefferbaum; Edith V. Sullivan; Kilian M. Pohl (NeuroImage, 2020)

Metadata Normalization. - Mandy Lu; Qingyu Zhao; Jiequan Zhang; Kilian M. Pohl; Li Fei-Fei 001; Juan Carlos Niebles; Ehsan Adeli 001 (CVPR, 2021)

Going Beyond Saliency Maps: Training Deep Models to Interpret Deep Models. - Zixuan Liu 001; Ehsan Adeli 001; Kilian M. Pohl; Qingyu Zhao (IPMI, 2021)

Representation Disentanglement for Multi-modal Brain MRI Analysis. - Jiahong Ouyang; Ehsan Adeli 001; Kilian M. Pohl; Qingyu Zhao; Greg Zaharchuk (IPMI, 2021)

Adversarial Bayesian Optimization for Quantifying Motion Artifact Within MRI. - Anastasia Butskova; Rain Juhl; Dzenan Zukic; Aashish Chaudhary; Kilian M. Pohl; Qingyu Zhao (PRIME@MICCAI, 2021)

Self-supervised Longitudinal Neighbourhood Embedding. - Jiahong Ouyang; Qingyu Zhao; Ehsan Adeli 001; Edith V. Sullivan; Adolf Pfefferbaum; Greg Zaharchuk; Kilian M. Pohl (MICCAI (2), 2021)

Longitudinal Correlation Analysis for Decoding Multi-modal Brain Development. - Qingyu Zhao; Ehsan Adeli 001; Kilian M. Pohl (MICCAI (7), 2021)

Representation Learning with Statistical Independence to Mitigate Bias. - Ehsan Adeli-Mosabbeb; Qingyu Zhao; Adolf Pfefferbaum; Edith V. Sullivan; Li Fei-Fei 001; Juan Carlos Niebles; Kilian M. Pohl (WACV, 2021)

Representation Disentanglement for Multi-modal MR Analysis. - Jiahong Ouyang; Ehsan Adeli 001; Kilian M. Pohl; Qingyu Zhao; Greg Zaharchuk (CoRR, 2021)

Quantifying Parkinson's disease motor severity under uncertainty using MDS-UPDRS videos. - Mandy Lu; Qingyu Zhao; Kathleen L. Poston; Edith V. Sullivan; Adolf Pfefferbaum; Marian Shahid; Maya Katz; Leila Montaser Kouhsari; Kevin A. Schulman; Arnold Milstein; Juan Carlos Niebles; Victor W. Henderson; et al. (Medical Image Anal., 2021)

Longitudinal self-supervised learning. - Qingyu Zhao; Zixuan Liu 001; Ehsan Adeli 001; Kilian M. Pohl (Medical Image Anal., 2021)

Longitudinal Pooling & Consistency Regularization to Model Disease Progression From MRIs. - Jiahong Ouyang; Qingyu Zhao; Edith V. Sullivan; Adolf Pfefferbaum; Susan F. Tapert; Ehsan Adeli 001; Kilian M. Pohl (IEEE J. Biomed. Health Informatics, 2021)

Identifying Auxiliary or Adversarial Tasks Using Necessary Condition Analysis for Adversarial Multi-task Video Understanding. - Stephen Su; Samuel Kwong; Qingyu Zhao; De-An Huang; Juan Carlos Niebles; Ehsan Adeli 001 (ECCV Workshops (6), 2022)

Joint Graph Convolution for Analyzing Brain Structural and Functional Connectome. - Yueting Li; Qingyue Wei; Ehsan Adeli 001; Kilian M. Pohl; Qingyu Zhao (MICCAI (1), 2022)

Bridging the Gap Between Deep Learning and Hypothesis-Driven Analysis via Permutation Testing. - Magdalini Paschali; Qingyu Zhao; Ehsan Adeli 001; Kilian M. Pohl (PRIME@MICCAI, 2022)

Multiple Instance Neuroimage Transformer. - Ayush Singla; Qingyu Zhao; Daniel K. Do; Yuyin Zhou; Kilian M. Pohl; Ehsan Adeli 001 (PRIME@MICCAI, 2022)

A Penalty Approach for Normalizing Feature Distributions to Build Confounder-Free Models. - Anthony Vento; Qingyu Zhao; Robert Paul; Kilian M. Pohl; Ehsan Adeli 001 (MICCAI (3), 2022)

Thin shell demons for dental scan registration. - Pranjal Sahu; Samuel Gerber; Qingyu Zhao; Tung Nguyen; Matt McCormick 001; Beatriz Paniagua; Jared Vicory (Image Processing, 2022)

Self-supervised learning of neighborhood embedding for longitudinal MRI. - Jiahong Ouyang; Qingyu Zhao; Ehsan Adeli 001; Greg Zaharchuk; Kilian M. Pohl (Medical Image Anal., 2022)

Multi-label, multi-domain learning identifies compounding effects of HIV and cognitive impairment. - Jiequan Zhang; Qingyu Zhao; Ehsan Adeli 001; Adolf Pfefferbaum; Edith V. Sullivan; Robert Paul; Victor G. Valcour; Kilian M. Pohl (Medical Image Anal., 2022)

Disentangling Normal Aging From Severity of Disease via Weak Supervision on Longitudinal MRI. - Jiahong Ouyang; Qingyu Zhao; Ehsan Adeli 001; Greg Zaharchuk; Kilian M. Pohl (IEEE Trans. Medical Imaging, 2022)

An Explainable Geometric-Weighted Graph Attention Network for Identifying Functional Networks Associated with Gait Impairment. - Favour Nerrise; Qingyu Zhao; Kathleen L. Poston; Kilian M. Pohl; Ehsan Adeli 001 (MICCAI (2), 2023)

LSOR: Longitudinally-Consistent Self-Organized Representation Learning. - Jiahong Ouyang; Qingyu Zhao; Ehsan Adeli 001; Wei Peng 009; Greg Zaharchuk; Kilian M. Pohl (MICCAI (1), 2023)

Generating Realistic Brain MRIs via a Conditional Diffusion Probabilistic Model. - Wei Peng 009; Ehsan Adeli 001; Tomas M. Bosschieter; Sanghyun Park 004; Qingyu Zhao; Kilian M. Pohl (MICCAI (8), 2023)

Imputing Brain Measurements Across Data Sets via Graph Neural Networks. - Yixin Wang; Wei Peng 009; Susan F. Tapert; Qingyu Zhao; Kilian M. Pohl (PRIME@MICCAI, 2023)

Metadata-Conditioned Generative Models to Synthesize Anatomically-Plausible 3D Brain MRIs. - Wei Peng 009; Tomas M. Bosschieter; Jiahong Ouyang; Robert Paul; Ehsan Adeli 001; Qingyu Zhao; Kilian M. Pohl (CoRR, 2023)

Enforcing Conditional Independence for Fair Representation Learning and Causal Image Generation. - Jensen Hwa; Qingyu Zhao; Aditya Lahiri; Adnan Masood; Babak Salimi; Ehsan Adeli 001 (CVPR Workshops, 2024)

SOM2LM: Self-Organized Multi-Modal Longitudinal Maps. - Jiahong Ouyang; Qingyu Zhao; Ehsan Adeli 001; Greg Zaharchuk; Kilian M. Pohl (MICCAI (2), 2024)

Spectral Graph Sample Weighting for Interpretable Sub-cohort Analysis in Predictive Models for Neuroimaging. - Magdalini Paschali; Yu Hang Jiang; Spencer Siegel; Camila González; Kilian M. Pohl; Akshay Chaudhari; Qingyu Zhao (PRIME@MICCAI, 2024)

Brain-Cognition Fingerprinting via Graph-GCCA with Contrastive Learning. - Yixin Wang; Wei Peng 009; Yu Zhang 009; Ehsan Adeli-Mosabbeb; Qingyu Zhao; Kilian M. Pohl (MLCN@MICCAI, 2024)

Latent 3D Brain MRI Counterfactual. - Wei Peng 009; Tian Xia; Fabio De Sousa Ribeiro; Tomas M. Bosschieter; Ehsan Adeli-Mosabbeb; Qingyu Zhao; Ben Glocker; Kilian M. Pohl (CoRR, 2024)

Metadata-conditioned generative models to synthesize anatomically-plausible 3D brain MRIs. - Wei Peng 009; Tomas M. Bosschieter; Jiahong Ouyang; Robert Paul; Edith V. Sullivan; Adolf Pfefferbaum; Ehsan Adeli 001; Qingyu Zhao; Kilian M. Pohl (Medical Image Anal., 2024)

Data-driven discovery of movement-linked heterogeneity in neurodegenerative diseases. - Mark Endo; Favour Nerrise; Qingyu Zhao; Edith V. Sullivan; Li Fei-Fei 001; Victor W. Henderson; Kilian M. Pohl; Kathleen L. Poston; Ehsan Adeli 001 (Nat. Mac. Intell., 2024)

Noncooperative Metal Object Detection Using Pole-to-Pole EM Distribution Characteristics for Wireless EV Charger Employing DD Coils. - Songyan Niu; Qingyu Zhao; Haibiao Chen; Shuangxia Niu; Linni Jian (IEEE Trans. Ind. Electron., 2024)

Anatomical Similarity as a New Metric to Evaluate Brain Generative Models. - Bahram Jafrasteh; Wei Peng 009; Cheng Wan; Yimin Luo; Ehsan Adeli 001; Qingyu Zhao (CoRR, 2025)

The Most Important Features in Generalized Additive Models Might Be Groups of Features. - Tomas M. Bosschieter; Luis Franca; Jessica Wolk; Yiyuan Wu; Bella Mehta; Joseph Dehoney; Orsolya Kiss; Fiona C. Baker; Qingyu Zhao; Rich Caruana; Kilian M. Pohl (CoRR, 2025)

Confounder-Free Continual Learning via Recursive Feature Normalization. - Yash Shah; Camila González; Mohammad Hasan Abbasi; Qingyu Zhao; Kilian M. Pohl; Ehsan Adeli 001 (CoRR, 2025)