scPLAN: a hierarchical computational framework for single transcriptomics data annotation, integration and cell-type label refinement. - Qirui Guo; Musu Yuan; Lei Zhang; Minghua Deng (Briefings Bioinform., 2024)

SPANN: annotating single-cell resolution spatial transcriptome data with scRNA-seq data. - Musu Yuan; Hui Wan; Zihao Wang; Qirui Guo; Minghua Deng (Briefings Bioinform., 2024)