Design of [2]rotaxane through image threshold segmentation of electrostatic potential image. - Pingying Liu; Qiufeng Chen; Jing Ma (J. Comput. Chem., 2016)

Graph-based RGB-D Image Segmentation Using Color-directional-region Merging. - Xiong Pan; Zejun Zhang 001; Yizhang Liu; Changcai Yang; Qiufeng Chen; Li Cheng; Jiaxiang Lin; Riqing Chen (ICASSP, 2019)

Advancing Graph Neural Networks with HL-HGAT: A Hodge-Laplacian and Attention Mechanism Approach for Heterogeneous Graph-Structured Data. - Jinghan Huang 002; Qiufeng Chen; Yijun Bian; Pengli Zhu; Nanguang Chen; Moo K. Chung; Anqi Qiu (CoRR, 2024)

DS-MVP: identifying disease-specific pathogenicity of missense variants by pre-training representation. - Qiufeng Chen; Lijun Quan; Lexin Cao; Bei Zhang; Zhijun Zhang; Liangchen Peng; Junkai Wang; Yelu Jiang; Liangpeng Nie; Geng Li; Tingfang Wu; Qiang Lyu (Briefings Bioinform., 2025)

AffiGrapher: Contrastive Heterogeneous Graph Learning with Aromatic Virtual Nodes for RNA-Small Molecule Binding Affinity Prediction. - Junkai Wang; Jian Wu; Zhijun Zhang; Yelu Jiang; Liangchen Peng; Bei Zhang; Qiufeng Chen; Lexin Cao; Lijun Quan; Qiang Lyu (J. Chem. Inf. Model., 2025)

MVCL-DTI: Predicting Drug-Target Interactions Using a Multiview Contrastive Learning Model on a Heterogeneous Graph. - Bei Zhang; Lijun Quan; Zhijun Zhang; Lexin Cao; Qiufeng Chen; Liangchen Peng; Junkai Wang; Yelu Jiang; Liangpeng Nie; Geng Li; Tingfang Wu; Qiang Lyu (J. Chem. Inf. Model., 2025)