Searching for bidirectional promoters in Arabidopsis thaliana. - Quan Wang 004; Lin Wan; Dayong Li; Lihuang Zhu; Minping Qian; Minghua Deng (BMC Bioinform., 2009)

A hybridization model for tiling array analysis. - Quan Wang 004; Linbo Wang; Minping Qian; Minghua Deng (BIBM Workshops, 2010)

Computational tools for copy number variation (CNV) detection using next-generation sequencing data: features and perspectives. - Min Zhao 006; Qingguo Wang; Quan Wang 004; Peilin Jia; Zhongming Zhao (BMC Bioinform., 2013)

EW_dmGWAS: edge-weighted dense module search for genome-wide association studies and gene expression profiles. - Quan Wang 004; Hui Yu; Zhongming Zhao; Peilin Jia (Bioinform., 2015)

Systematic dissection of dysregulated transcription factor-miRNA feed-forward loops across tumor types. - Wei Jiang 023; Ramkrishna Mitra; Chen-Ching Lin; Quan Wang 004; Feixiong Cheng; Zhongming Zhao (Briefings Bioinform., 2016)

De novo pattern discovery enables robust assessment of functional consequences of non-coding variants. - Hai Yang 002; Rui Chen 021; Quan Wang 004; Qiang Wei; Ying Ji 002; Guangze Zheng 002; Xue Zhong; Nancy J. Cox; Bingshan Li (Bioinform., 2019)

DRAMS: A tool to detect and re-align mixed-up samples for integrative studies of multi-omics data. - Yi Jiang; Gina Giase; Kay Grennan; Annie W. Shieh; Yan Xia; Lide Han; Quan Wang 004; Qiang Wei; Rui Chen 021; Sihan Liu; Kevin P. White; Chao Chen 041; et al. (PLoS Comput. Biol., 2020)

A Bayesian framework to integrate multi-level genome-scale data for Autism risk gene prioritization. - Ying Ji 002; Rui Chen 021; Quan Wang 004; Qiang Wei; Ran Tao; Bingshan Li (BMC Bioinform., 2022)

TVAR: assessing tissue-specific functional effects of non-coding variants with deep learning. - Hai Yang 002; Rui Chen 021; Quan Wang 004; Qiang Wei; Ying Ji 002; Xue Zhong; Bingshan Li (Bioinform., 2022)