OpenCL-based FPGA Accelerator for Semi-Global Approximate String Matching Using Diagonal Bit-Vectors. - David Castells-Rufas; Santiago Marco-Sola; Quim Aguado-Puig; Antonio Espinosa-Morales; Juan Carlos Moure; Lluc Alvarez; Miquel Moretó (FPL, 2021)

Accelerating Edit-Distance Sequence Alignment on GPU Using the Wavefront Algorithm. - Quim Aguado-Puig; Santiago Marco-Sola; Juan Carlos Moure; David Castells-Rufas; Lluc Alvarez; Antonio Espinosa 001; Miquel Moretó (IEEE Access, 2022)

FPGA Acceleration of Pre-Alignment Filters for Short Read Mapping With HLS. - David Castells-Rufas; Santiago Marco-Sola; Juan Carlos Moure; Quim Aguado-Puig; Antonio Espinosa 001 (IEEE Access, 2022)

GMX: Instruction Set Extensions for Fast, Scalable, and Efficient Genome Sequence Alignment. - Max Doblas; Oscar Lostes-Cazorla; Quim Aguado-Puig; Nick Cebry; Pau Fontova-Musté; Christopher Frances Batten; Santiago Marco-Sola; Miquel Moretó (MICRO, 2023)

WFA-GPU: gap-affine pairwise read-alignment using GPUs. - Quim Aguado-Puig; Max Doblas; Christos Matzoros; Antonio Espinosa 001; Juan Carlos Moure; Santiago Marco-Sola; Miquel Moretó (Bioinform., 2023)

GenArchBench: A genomics benchmark suite for arm HPC processors. - Lorién López-Villellas; Rubén Langarita-Benítez; Asaf Badouh; Víctor Soria Pardos; Quim Aguado-Puig; Guillem López-Paradís; Max Doblas; Javier Setoain; Chulho Kim; Makoto Ono; Adrià Armejach; Santiago Marco-Sola; et al. (Future Gener. Comput. Syst., 2024)