Dynamic Data Distribution Algorithm Based on Behavior Model. - Lihua Yue; Xiaoyu Yang; Qunfeng Dong (JCIS, 2002)

A linear-time algorithm for solving the molecular distance geometry problem with exact inter-atomic distances. - Qunfeng Dong; Zhijun Wu (J. Glob. Optim., 2002)

A Geometric Build-Up Algorithm for Solving the Molecular Distance Geometry Problem with Sparse Distance Data. - Qunfeng Dong; Zhijun Wu (J. Glob. Optim., 2003)

ZmDB, an integrated database for maize genome research. - Qunfeng Dong; Laura Roy; Michael Freeling; Virginia Walbot; Volker Brendel (Nucleic Acids Res., 2003)

GeneSeqer add PlantGDB: gene structure prediction in plant genomes. - Shannon D. Schlueter; Qunfeng Dong; Volker Brendel (Nucleic Acids Res., 2003)

PlantGDB, plant genome database and analysis tools. - Qunfeng Dong; Shannon D. Schlueter; Volker Brendel (Nucleic Acids Res., 2004)

MaizeGDB, the community database for maize genetics and genomics. - Carolyn J. Lawrence; Qunfeng Dong; Mary L. Polacco; Trent E. Seigfried; Volker Brendel (Nucleic Acids Res., 2004)

Efficient Probabilistic Packet Marking. - Qunfeng Dong; Suman Banerjee 001; Micah Adler; Kazu Hirata (ICNP, 2005)

Maximizing system lifetime in wireless sensor networks. - Qunfeng Dong (IPSN, 2005)

Minimum energy reliable paths using unreliable wireless links. - Qunfeng Dong; Suman Banerjee 001; Micah Adler; Archan Misra (MobiHoc, 2005)

Throughput Optimization and Fair Bandwidth Allocation in Multi-Hop Wireless LANs. - Qunfeng Dong; Suman Banerjee 001; Benyuan Liu (INFOCOM, 2006)

Packet classifiers in ternary CAMs can be smaller. - Qunfeng Dong; Suman Banerjee 001; Jia Wang; Dheeraj Agrawal; Ashutosh Shukla (SIGMETRICS/Performance, 2006)

Practical network coding in wireless networks. - Qunfeng Dong; Jianming Wu; Wenjun Hu; Jon Crowcroft (MobiCom, 2007)

Wire speed packet classification without tcams: a few more registers (and a bit of logic) are enough. - Qunfeng Dong; Suman Banerjee 001; Jia Wang; Dheeraj Agrawal (SIGMETRICS, 2007)

Tracembler - software for in-silico chromosome walking in unassembled genomes. - Qunfeng Dong; Matthew D. Wilkerson; Volker Brendel (BMC Bioinform., 2007)

TableMaker: An ad hoc Query Tool for Relational Databases. - Carol Lushbough; Jon Duvick; Qunfeng Dong; Douglas M. Jennewein; Joe Reynoldson; Volker Brendel (BIOCOMP, 2008)

Building Robust Nomadic Wireless Mesh Networks Using Directional Antennas. - Qunfeng Dong; Yigal Bejerano (INFOCOM, 2008)

Load balancing in large-scale RFID systems. - Qunfeng Dong; Ashutosh Shukla; Vivek Shrivastava; Dheeraj Agrawal; Suman Banerjee 001; Koushik Kar (Comput. Networks, 2008)

Distributed Construction of Fault Resilient High Capacity Wireless Networks with Bounded Node Degree. - Yigal Bejerano; Qunfeng Dong (INFOCOM, 2009)

WebGBrowse - a web server for GBrowse. - Ram Podicheti; Rajesh Gollapudi; Qunfeng Dong (Bioinform., 2009)

A web-based software system for dynamic gene cluster comparison across multiple genomes. - Kashi Vishwanath Revanna; Vivek Krishnakumar; Qunfeng Dong (Bioinform., 2009)

An Ergatis-based prokaryotic genome annotation web server. - Chris Hemmerich; Aaron Buechlein; Ram Podicheti; Kashi Vishwanath Revanna; Qunfeng Dong (Bioinform., 2010)

Chain-Based DFA Deflation for Fast and Scalable Regular Expression Matching Using TCAM. - Kunyang Peng; Siyuan Tang; Min Chen; Qunfeng Dong (ANCS, 2011)

An efficient SVM-based method for multi-class network traffic classification. - Ning Jing; Ming Yang; Shaoyin Cheng; Qunfeng Dong; Hui Xiong (IPCCC, 2011)

TCAM-based DFA deflation: A novel approach to fast and scalable regular expression matching. - Kunyang Peng; Qunfeng Dong; Min Chen (IWQoS, 2011)

GSV: A Web-based Genome Synteny Viewer for Customized Data. - Kashi Vishwanath Revanna; Chi-Chen Chiu; Ezekiel Bierschank; Qunfeng Dong (BMC Bioinform., 2011)

GPU-based NFA implementation for memory efficient high speed regular expression matching. - Yuan Zu; Ming Yang; Zhonghu Xu; Lin Wang; Xin Tian 007; Kunyang Peng; Qunfeng Dong (PPoPP, 2012)

TCAM-based NFA implementation. - Kunyang Peng; Qunfeng Dong (SIGMETRICS, 2012)

Interpolative multidimensional scaling techniques for the identification of clusters in very large sequence sets. - Adam Hughes; Yang Ruan; Saliya Ekanayake; Seung-Hee Bae; Qunfeng Dong; Mina Rho; Judy Qiu; Geoffrey C. Fox (BMC Bioinform., 2012)

A web-based multi-genome synteny viewer for customized data. - Kashi Vishwanath Revanna; Daniel Munro; Alvin Gao; Chi-Chen Chiu; Anil Pathak; Qunfeng Dong (BMC Bioinform., 2012)

POSTER: "Pseudomonas fluorescens Strain NCIMB 11764, a unique bacterium with cyanide adaptation features". - Claudia Vilo; Daniel Kunz; Xiang Gao; Qunfeng Dong (ICCABS, 2013)

NameFilter: Achieving fast name lookup with low memory cost via applying two-stage Bloom filters. - Yi Wang 004; Tian Pan 001; Zhian Mi; Huichen Dai; Xiaoyu Guo; Ting Zhang 010; Bin Liu 001; Qunfeng Dong (INFOCOM, 2013)

Wire Speed Name Lookup: A GPU-based Approach. - Yi Wang 004; Yuan Zu; Ting Zhang 010; Kunyang Peng; Qunfeng Dong; Bin Liu 001; Wei Meng 001; Huichen Dai; Xin Tian 007; Zhonghu Xu; Hao Wu 023; Di Yang (NSDI, 2013)

Gradient-based Wiener filter for image denoising. - Xiaobo Zhang; Xiang-Chu Feng; Weiwei Wang 005; Shunli Zhang; Qunfeng Dong (Comput. Electr. Eng., 2013)

A Case for a Flexible Scalar Unit in SIMT Architecture. - Yi Yang 018; Ping Xiang; Michael Mantor; Norman Rubin; Lisa R. Hsu; Qunfeng Dong; Huiyang Zhou (IPDPS, 2014)

WaveCube: A scalable, fault-tolerant, high-performance optical data center architecture. - Kai Chen 005; Xitao Wen; Xingyu Ma; Yan Chen 004; Yong Xia 007; Chengchen Hu; Qunfeng Dong (INFOCOM, 2015)

A Bayesian taxonomic classification method for 16S rRNA gene sequences with improved species-level accuracy. - Xiang Gao; Huaiying Lin; Kashi Vishwanath Revanna; Qunfeng Dong (BMC Bioinform., 2017)

Toward A Scalable, Fault-Tolerant, High-Performance Optical Data Center Architecture. - Kai Chen 005; Xitao Wen; Xingyu Ma; Yan Chen 004; Yong Xia 007; Chengchen Hu; Qunfeng Dong; Yongqiang Liu (IEEE/ACM Trans. Netw., 2017)

Estimation of Node Cache Occupancy in Satellite Storage Network. - Erbao Wang; Qunfeng Dong; Yongan Li; Yuye Zhang (IEEE Access, 2021)

A Bayesian framework for estimating the risk ratio of hospitalization for people with comorbidity infected by SARS-CoV-2 virus. - Xiang Gao; Qunfeng Dong (J. Am. Medical Informatics Assoc., 2021)

Content Placement Considering the Temporal and Spatial Attributes of Content Popularity in Cache-Enabled UAV Networks. - Erbao Wang; Qunfeng Dong; Yongan Li; Yuye Zhang (IEEE Wirel. Commun. Lett., 2022)