Electromagnetic considerations for RF current density imaging [MRI technique]. - Greig C. Scott; Michael L. G. Joy; Robin L. Armstrong; R. Mark Henkelman (IEEE Trans. Medical Imaging, 1995)

Segmentation, Registration, and Deformation Analysis of 3D MR Images of Mice. - Ghassan Hamarneh; X. Josette Chen; Brian Neiman; Jeff Henderson; R. Mark Henkelman (MICCAI (2), 2003)

Anatomically Guided Registration of Whole Body Mouse MR Images. - Natasa Kovacevic; Ghassan Hamarneh; R. Mark Henkelman (MICCAI (2), 2003)

Deformation Based Representation of Groupwise Average and Variability. - Natasa Kovacevic; X. Josette Chen; John G. Sled; Jeff Henderson; R. Mark Henkelman (MICCAI (1), 2004)

Neuroanatomical differences between mouse strains as shown by high-resolution 3D MRI. - X. Josette Chen; Natasa Kovacevic; Nancy J. Lobaugh; John G. Sled; R. Mark Henkelman; Jeff Henderson (NeuroImage, 2006)

Sexual dimorphism revealed in the structure of the mouse brain using three-dimensional magnetic resonance imaging. - Shoshana Spring; Jason P. Lerch; R. Mark Henkelman (NeuroImage, 2007)

High resolution three-dimensional brain atlas using an average magnetic resonance image of 40 adult C57Bl/6J mice. - A. E. Dorr; Jason P. Lerch; Shoshana Spring; Noor Jehan Kabani; R. Mark Henkelman (NeuroImage, 2008)

Longitudinal neuroanatomical changes determined by deformation-based morphometry in a mouse model of Alzheimer's disease. - Jonathan C. Lau; Jason P. Lerch; John G. Sled; R. Mark Henkelman; Alan C. Evans; Barry J. Bedell (NeuroImage, 2008)

Cortical thickness measured from MRI in the YAC128 mouse model of Huntington's disease. - Jason P. Lerch; Jeffrey B. Carroll; Adrienne Dorr; Shoshana Spring; Alan C. Evans; Michael R. Hayden; John G. Sled; R. Mark Henkelman (NeuroImage, 2008)

Automated deformation analysis in the YAC128 Huntington disease mouse model. - Jason P. Lerch; Jeffrey B. Carroll; Shoshana Spring; Lisa N. Bertram; Claudia Schwab; Michael R. Hayden; R. Mark Henkelman (NeuroImage, 2008)

Measurement of cerebral blood volume in mouse brain regions using micro-computed tomography. - Brige P. Chugh; Jason P. Lerch; Lisa X. Yu; Martin Pienkowski; Robert V. Harrison; R. Mark Henkelman; John G. Sled (NeuroImage, 2009)

Image registration of whole-body mouse MRI. - X. Josette Chen; Satheesh Maheswaran; Daniel Rueckert; R. Mark Henkelman (ISBI, 2010)

Atlas-based organ & bone approximation for ex-vivo µMRI mouse data: a pilot study. - Artem Khmelinskii; Martin Baiker; X. Josette Chen; Johan H. C. Reiber; R. Mark Henkelman; Boudewijn P. F. Lelieveldt (ISBI, 2010)

Anatomical phenotyping in a mouse model of fragile X syndrome with magnetic resonance imaging. - Jacob Ellegood; Laura K. Pacey; David R. Hampson; Jason P. Lerch; R. Mark Henkelman (NeuroImage, 2010)

Cerebral asymmetries in 12-week-old C57Bl/6J mice measured by magnetic resonance imaging. - Shoshana Spring; Jason P. Lerch; Monica K. Wetzel; Alan C. Evans; R. Mark Henkelman (NeuroImage, 2010)

Semi-Automatic Segmentation of Multiple Mouse Embryos in MR Images. - Leila Baghdadi; Mojdeh Zamyadi; John G. Sled; Jürgen E. Schneider; Shuomo Bhattacharya; R. Mark Henkelman; Jason P. Lerch (BMC Bioinform., 2011)

Maze training in mice induces MRI-detectable brain shape changes specific to the type of learning. - Jason P. Lerch; Adelaide P. Yiu; Alonso Martinez-Canabal; Tetyana Pekar; Veronique D. Bohbot; Paul W. Frankland; R. Mark Henkelman; Sheena A. Josselyn; John G. Sled (NeuroImage, 2011)

Wanted dead or alive? The tradeoff between in-vivo versus ex-vivo MR brain imaging in the mouse. - Jason P. Lerch; Lisa Gazdzinski; Jürgen Germann; John G. Sled; R. Mark Henkelman; Brian J. Nieman (Frontiers Neuroinformatics, 2012)

Preparation of fixed mouse brains for MRI. - Lindsay S. Cahill; Christine L. Laliberté; Jacob Ellegood; Shoshana Spring; Jacqueline A. Gleave; Matthijs C. van Eede; Jason P. Lerch; R. Mark Henkelman (NeuroImage, 2012)

Mapping registration sensitivity in MR mouse brain images. - Matthijs C. van Eede; Jan Scholz; M. Mallar Chakravarty; R. Mark Henkelman; Jason P. Lerch (NeuroImage, 2013)

Neuroanatomical analysis of the BTBR mouse model of autism using magnetic resonance imaging and diffusion tensor imaging. - Jacob Ellegood; Brooke A. Babineau; R. Mark Henkelman; Jason P. Lerch; Jacqueline N. Crawley (NeuroImage, 2013)

Complex interplay between brain function and structure during cerebral amyloidosis in APP transgenic mouse strains revealed by multi-parametric MRI comparison. - Joanes Grandjean; Rebecca Derungs; Luka Kulic; Tobias Welt; R. Mark Henkelman; Roger M. Nitsch; Markus Rudin (NeuroImage, 2016)

Variability of brain anatomy for three common mouse strains. - Jan Scholz; Christine L. Laliberté; Matthijs C. van Eede; Jason P. Lerch; R. Mark Henkelman (NeuroImage, 2016)

Spatial gene expression analysis of neuroanatomical differences in mouse models. - Darren J. Fernandes; Jacob Ellegood; Rand Askalan; Randy D. Blakely; Emanuel Dicicco-Bloom; Sean E. Egan; Lucy R. Osborne; Craig M. Powell; Armin Raznahan; Diane M. Robins; Michael W. Salter; Ameet S. Sengar; et al. (NeuroImage, 2017)

Multiple-mouse magnetic resonance imaging with cryogenic radiofrequency probes for evaluation of brain development. - A. Arbabi; Leigh Spencer Noakes; Dulcie A. Vousden; J. Dazai; Shoshana Spring; O. Botelho; T. Keshavarzian; M. Mattingly; Jacob Ellegood; L. M. J. Nutter; R. Wissmann; John G. Sled; et al. (NeuroImage, 2022)