Poster: Scaffolding draft genomes using paired sequencing data. - James Lindsay; J. Zhang; T. Farnham; Y. Wu; Ion I. Mandoiu; Rachel J. O'Neill; Hamed Salooti; E. Bullwinkel; Alexander Zelikovsky (ICCABS, 2011)

Workshop: The utility of next generation sequencing for genome scale studies. - Rachel J. O'Neill; James Lindsay; Dawn Carone; Sahar Al Seesi; Thomas Heider; Ion I. Mandoiu; Andrew Pask (ICCABS, 2011)

Invited: Using novel small RNAs to understand genome structure and function. - Rachel J. O'Neill; Mark Longo; Chu Zhang; Sarah Trusiak; Laura Hall; Judy Brown; Craig Obergfell (ICCABS, 2012)

Workshop: Bioinformatics methods for reconstruction of Infectious Bronchitis Virus quasispecies from next generation sequencing data. - Rachel J. O'Neill; Ion I. Mandoiu; Mazhar I. Khan; Craig Obergfell; Hongjun Wang; Andrew Bligh; Bassam Tork; Nicholas Mancuso; Alexander Zelikovsky (ICCABS, 2012)

Deep statistical modelling of nanopore sequencing translocation times reveals latent non-B DNA structures. - Marjan Hosseini; Aaron Palmer; William Manka; Patrick G. S. Grady; Venkata Patchigolla; Jinbo Bi; Rachel J. O'Neill; Zhiyi Chi; Derek Aguiar (Bioinform., 2023)