A framework for the development of Biomedical Text Mining software tools. - Anália Lourenço; Rafael Carreira; Sónia Carneiro; Paulo Maia; Daniel Glez-Peña; Florentino Fdez-Riverola; Eugénio C. Ferreira; Isabel Rocha; Miguel Rocha 001 (BIBE, 2008)

Biomedical Text Mining Applied to Document Retrieval and Semantic Indexing. - Anália Lourenço; Sónia Carneiro; Eugénio C. Ferreira; Rafael Carreira; Luis M. Rocha; Daniel Glez-Peña; José Ramón Méndez 001; Florentino Fdez-Riverola; Fernando Díaz 001; Isabel Rocha; Miguel Rocha 001 (IWANN (2), 2009)

@Note: A workbench for Biomedical Text Mining. - Anália Lourenço; Rafael Carreira; Sónia Carneiro; Paulo Maia; Daniel Glez-Peña; Florentino Fdez-Riverola; Eugénio C. Ferreira; Isabel Rocha; Miguel Rocha 001 (J. Biomed. Informatics, 2009)

BioDR: Semantic indexing networks for biomedical document retrieval. - Anália Lourenço; Rafael Carreira; Daniel Glez-Peña; José Ramón Méndez 001; Sónia Carneiro; Luis Mateus Rocha; Fernando Díaz 001; Eugénio C. Ferreira; Isabel Rocha; Florentino Fdez-Riverola; Miguel Rocha 001 (Expert Syst. Appl., 2010)

Semantic annotation of biological concepts interplaying microbial cellular responses. - Rafael Carreira; Sónia Carneiro; Rui Pereira; Miguel Rocha 001; Isabel Rocha; Eugénio C. Ferreira; Anália Lourenço (BMC Bioinform., 2011)

A Machine Learning and Chemometrics Assisted Interpretation of Spectroscopic Data - A NMR-Based Metabolomics Platform for the Assessment of Brazilian Propolis. - Marcelo Maraschin; Amélia Somensi-Zeggio; Simone K. Oliveira; Shirley Kuhnen; Maíra M. Tomazzoli; Ana C. M. Zeri; Rafael Carreira; Miguel Rocha 001 (PRIB, 2012)

Algorithms to infer metabolic flux ratios from fluxomics data. - Rafael Carreira; Miguel Rocha 001; Silas Granato Villas-Bôas; Isabel Rocha (BIBM, 2013)

CBFA: phenotype prediction integrating metabolic models with constraints derived from experimental data. - Rafael Carreira; Pedro Evangelista; Paulo Maia; Paulo Vilaça; Marcellinus Pont; Jean-François Tomb; Isabel Rocha; Miguel Rocha 001 (BMC Syst. Biol., 2014)

Predicting the number of biochemical transformations needed to synthesize a compound. - João Correia 002; Rafael Carreira; Vitor Pereira 001; Miguel Rocha 001 (IJCNN, 2022)