A strategy for refining the calculation of contacts in protein-RNA complexes. - Luana Luiza Bastos; Rafael P. Lemos; Diego C. B. Mariano; Raquel Cardoso de Melo Minardi (BSB, 2024)

Using graph-based structural signatures and machine learning algorithms for molecular docking assessment of histone deacetylases and small ligands. - Alessandra Gomes Cioletti; Rafael P. Lemos; Lucas Moraes dos Santos; Diego C. B. Mariano; Raquel Cardoso de Melo Minardi (BSB, 2024)

COCαDA - Large-Scale Protein Interatomic Contact Cutoff Optimization by Cα Distance Matrices. - Rafael P. Lemos; Diego C. B. Mariano; Sabrina de Azevedo Silveira; Raquel Cardoso de Melo Minardi (BSB, 2024)

Predicting Mutation-Driven Changes in the SARS-CoV-2 Spike Protein Using Structural Signatures and Neural Networks. - Eduardo U. M. Moreira; Leandro Morais; Sheila Cruz Araujo; Rafael P. Lemos; Ana Luísa A. Bastos; Alessandra Lima da Silva; Diego C. B. Mariano; Raquel Cardoso de Melo Minardi (BSB, 2024)