Stereochemical Criteria for Prediction of the Effects of Proline Mutations on Protein Stability. - Kanika Bajaj; Mallur S. Madhusudhan; Bharat V. Adkar; Purbani Chakrabarti; C. Ramakrishnan; Andrej Sali; Raghavan Varadarajan (PLoS Comput. Biol., 2007)

DEPTH: a web server to compute depth and predict small-molecule binding cavities in proteins. - Kuan Pern Tan; Raghavan Varadarajan; Mallur S. Madhusudhan (Nucleic Acids Res., 2011)

Extraction of Robust Voids and Pockets in Proteins. - Raghavendra Sridharamurthy; Harish Doraiswamy; Siddharth Patel; Raghavan Varadarajan; Vijay Natarajan (EuroVis (Short Papers), 2013)

Depth: a web server to compute depth, cavity sizes, detect potential small-molecule ligand-binding cavities and predict the pKa of ionizable residues in proteins. - Kuan Pern Tan; Thanh Binh Nguyen 007; Siddharth Patel; Raghavan Varadarajan; Mallur S. Madhusudhan (Nucleic Acids Res., 2013)

TSpred: a web server for the rational design of temperature-sensitive mutants. - Kuan Pern Tan; Shruti Khare; Raghavan Varadarajan; Mallur Srivatsan Madhusudhan (Nucleic Acids Res., 2014)

Extraction of Robust Voids and Pockets in Proteins. - Raghavendra Sridharamurthy; Talha Bin Masood; Harish Doraiswamy; Siddharth Patel; Raghavan Varadarajan; Vijay Natarajan (Visualization in Medicine and Life Sciences III, 2016)