Mapping the stabilome: a novel computational method for classifying metabolic protein stability. - Ralph Patrick; Kim-Anh Lê Cao; Melissa J. Davis; Bostjan Kobe; Mikael Bodén (BMC Syst. Biol., 2012)

PhosphoPICK: modelling cellular context to map kinase-substrate phosphorylation events. - Ralph Patrick; Kim-Anh Lê Cao; Bostjan Kobe; Mikael Bodén (Bioinform., 2015)

PhosphoPICK-SNP: quantifying the effect of amino acid variants on protein phosphorylation. - Ralph Patrick; Bostjan Kobe; Kim-Anh Lê Cao; Mikael Bodén (Bioinform., 2017)