A novel mathematical basis for predicting somatic single nucleotide variants from next-generation sequencing. - Eric Bareke; Jean-François Spinella; Ramon Vidal; Jasmine Healy; Daniel Sinnett; Miklós Csürös (BCB, 2012)

Joint genotype inference with germline and somatic mutations. - Eric Bareke; Virginie Saillour; Jean-François Spinella; Ramon Vidal; Jasmine Healy; Daniel Sinnett; Miklós Csürös (BMC Bioinform., 2013)

Oasis: online analysis of small RNA deep sequencing data. - Vincenzo Capece; Julio C. Garcia Vizcaino; Ramon Vidal; Raza-Ur Rahman; Tonatiuh Pena Centeno; Orr Shomroni; Irantzu Suberviola; André Fischer; Stefan Bonn (Bioinform., 2015)