SPIKE - a database, visualization and analysis tool of cellular signaling pathways. - Ran Elkon; Rita Vesterman; Nira Amit; Igor Ulitsky; Idan Zohar; Mali Weisz; Gilad Mass; Nir Orlev; Giora Sternberg; Ran Blekhman; Jackie Assa; Yosef Shiloh; et al. (BMC Bioinform., 2008)

Compendium Manager: a tool for coordination of workflow management instances for bulk data processing in Python. - Richard J. Abdill; Ran Blekhman (CoRR, 2025)