ESTminer: a suite of programs for gene and allele identification. - Rex T. Nelson; David M. Grant; Randy C. Shoemaker (Bioinform., 2005)

The Legume Information System (LIS): an integrated information resource for comparative legume biology. - Michael D. Gonzales; Eric Archuleta; Andrew D. Farmer; Kamal Gajendran; David M. Grant; Randy C. Shoemaker; William D. Beavis; Mark E. Waugh (Nucleic Acids Res., 2005)

Applying Small-Scale DNA Signatures as an Aid in Assembling Soybean Chromosome Sequences. - Myron Peto; David M. Grant; Randy C. Shoemaker; Steven B. Cannon (Adv. Bioinformatics, 2010)

Applications and methods utilizing the Simple Semantic Web Architecture and Protocol (SSWAP) for bioinformatics resource discovery and disparate data and service integration. - Rex T. Nelson; Shulamit Avraham; Randy C. Shoemaker; Gregory D. May; Doreen Ware; Damian Gessler (BioData Min., 2010)

SoyBase, the USDA-ARS soybean genetics and genomics database. - David M. Grant; Rex T. Nelson; Steven B. Cannon; Randy C. Shoemaker (Nucleic Acids Res., 2010)