Cross species modeling of bacterial metabolism reveals new insights about their intra-community and inter-host interactions - Raphy Zarecki (2013)

A Novel Nutritional Predictor Links Microbial Fastidiousness with Lowered Ubiquity, Growth Rate, and Cooperativeness. - Raphy Zarecki; Matthew A. Oberhardt; Leah Reshef; Uri Gophna; Eytan Ruppin (PLoS Comput. Biol., 2014)

Systems-Wide Prediction of Enzyme Promiscuity Reveals a New Underground Alternative Route for Pyridoxal 5'-Phosphate Production in E. coli. - Matthew A. Oberhardt; Raphy Zarecki; Leah Reshef; Fangfang Xia; Miquel Duran-Frigola; Rachel Schreiber; Christopher S. Henry; Nir Ben-Tal; Daniel J. Dwyer; Uri Gophna; Eytan Ruppin (PLoS Comput. Biol., 2016)