ccostr: An R package for estimating mean costs with censored data. - Lars Børty; Rasmus Froberg Brøndum; Martin Bøgsted (J. Open Source Softw., 2019)

Implementing the FAIR Data Principles in precision oncology: review of supporting initiatives. - Charles Vesteghem; Rasmus Froberg Brøndum; Mads Sønderkær; Mia Sommer; Alexander Schmitz; Julie Støve Bødker; Karen Dybkær; Tarec Christoffer El-Galaly; Martin Bøgsted (Briefings Bioinform., 2020)

Regression on imperfect class labels derived by unsupervised clustering. - Rasmus Froberg Brøndum; Thomas Yssing Michaelsen; Martin Bøgsted (Briefings Bioinform., 2021)

On the Relation Between Autoencoders and Non-negative Matrix Factorization, and Their Application for Mutational Signature Extraction. - Ida Egendal; Rasmus Froberg Brøndum; Marta Pelizzola; Asger Hobolth; Martin Bøgsted (CoRR, 2024)

On the Relation Between Linear Autoencoders and Non-Negative Matrix Factorization for Mutational Signature Extraction. - Ida Egendal; Rasmus Froberg Brøndum; Marta Pelizzola; Asger Hobolth; Martin Bøgsted (J. Comput. Biol., 2025)