Comparing Trees in a Phylogenetic Relationship Repository. - John Bluis; Ravi Nori; Hsin-Wei Wang; Pinglei Zhou; J. Peter Gogarten; Dong-Guk Shin (BIBE, 2001)

A Computational Inference Framework for analyzing Gene Regulation Pathway using Microarray Data. - Dong-Guk Shin; John Bluis; Yoo Ah Kim; Winfried Krueger; Jeffrey Maddox; Ravi Nori; Nathan Viniconis; Hsin-Wei Wang; Alan Wong; David W. Rowe (BIBE, 2006)

Meta Analysis of Microarray Data Using Gene Regulation Pathways. - Saira Ali Kazmi; Yoo-Ah Kim; Baikang Pei; Ravi Nori; David W. Rowe; Hsin-Wei Wang; Alan Wong; Dong-Guk Shin (BIBM, 2008)

PBC: A Software Framework Facilitating Pattern-Based Clustering for Microarray Data Analysis. - Dong-Guk Shin; Seung-Hyun Hong; Pujan Joshi; Ravi Nori; Baikang Pei; Hsin-Wei Wang; Patrick Harrington; Lynn Kuo; Ivo Kalajzic; David W. Rowe (IJCBS, 2009)

Computing Consistency Between Microarray Data and Known Gene Regulation Relationships. - Dong-Guk Shin; Saira Ali Kazmi; Baikang Pei; Yoo-Ah Kim; Jeffrey Maddox; Ravi Nori; Alan Wong; Winfried Krueger; David W. Rowe (IEEE Trans. Inf. Technol. Biomed., 2009)