A Mathematica Solver for Two-Point Singularly-Perturbed Boundary Value Problems. - Raya Khanin (CASC, 2001)

Dimensional analysis in computer algebra. - Raya Khanin (ISSAC, 2001)

Parallelization of Perturbation Analysis: Application to Large-scale Engineering Problems. - Raya Khanin; Matthew P. Cartmell (J. Symb. Comput., 2001)

A Lagrangian multibody code for deriving the symbolic state-space equations of motion for open-loop systems containing flexible beams. - David I. M. Forehand; Raya Khanin; Matthew P. Cartmell (Math. Comput. Simul., 2004)

Investigation of the Double Pendulum System by the Normal Form Method in MATHEMATICA. - Victor F. Edneral; Raya Khanin (Program. Comput. Softw., 2004)

An experimental evaluation of a loop versus a reference design for two-channel microarrays. - Veronica Vinciotti; Raya Khanin; Davide D'Alimonte; Xiaohui Liu 001; N. Cattini; G. Hotchkiss; Giselda Bucca; O. de Jesus; J. Rasaiyaah; Colin P. Smith; Paul Kellam; Ernst Wit (Bioinform., 2005)

Computational inference of regulator activity in a single input motif from gene expression data. - Raya Khanin; Veronica Vinciotti; Vassilis Mersinias; Colin P. Smith; Ernst Wit (BMC Bioinform., 2005)

How Scale-Free Are Biological Networks. - Raya Khanin; Ernst Wit (J. Comput. Biol., 2006)

Bayesian model-based inference of transcription factor activity. - Simon Rogers; Raya Khanin; Mark A. Girolami (BMC Bioinform., 2007)

Computational Modeling of Post-Transcriptional Gene Regulation by MicroRNAs. - Raya Khanin; Veronica Vinciotti (J. Comput. Biol., 2008)

Chemical Master Equation and Langevin regimes for a gene transcription model. - Raya Khanin; Desmond J. Higham (Theor. Comput. Sci., 2008)