The TIGR Gene Indices: analysis of gene transcript sequences in highly sampled eukaryotic species. - John Quackenbush; Jennifer Cho; Daniel Lee; Feng Liang; Ingeborg Holt; Svetlana Karamycheva; Babak Parvizi; Geo Pertea; Razvan Sultana; Joseph White (Nucleic Acids Res., 2001)

TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets. - Geo Pertea; Xiaoqiu Huang 001; Feng Liang; Valentin Antonescu; Razvan Sultana; Svetlana Karamycheva; Yuandan Lee; Joseph White; Foo Cheung; Babak Parvizi; Jennifer Tsai; John Quackenbush (Bioinform., 2003)

The TIGR rice genome annotation resource: annotating the rice genome and creating resources for plant biologists. - Qiaoping Yuan; Shu Ouyang; Jia Liu; Bernard B. Suh; Foo Cheung; Razvan Sultana; Daniel Lee; John Quackenbush; C. Robin Buell (Nucleic Acids Res., 2003)

The TIGR Gene Indices: clustering and assembling EST and known genes and integration with eukaryotic genomes. - Yuandan Lee; Jennifer Tsai; S. Sunkara; Svetlana Karamycheva; Geo Pertea; Razvan Sultana; Valentin Antonescu; Agnes P. Chan; Foo Cheung; John Quackenbush (Nucleic Acids Res., 2005)

GeneSigDB - a curated database of gene expression signatures. - Aedín C. Culhane; Thomas Schwarzl; Razvan Sultana; Kermshlise C. Picard; Shaita C. Picard; Tim H. Lu; Katherine R. Franklin; Simon J. French; Gerald Papenhausen; Mick Correll; John Quackenbush (Nucleic Acids Res., 2010)

nEASE: a method for gene ontology subclassification of high-throughput gene expression data. - Thomas W. Chittenden; Eleanor Howe; Jennifer M. Taylor; Jessica Cara Mar; Martin J. Aryee; Harold Gómez; Razvan Sultana; John C. Braisted; Sarita J. Nair; John Quackenbush; Chris Holmes (Bioinform., 2012)

Estimation of sequencing error rates in short reads. - Xin Victoria Wang; Natalie Blades; Jie Ding; Razvan Sultana; Giovanni Parmigiani (BMC Bioinform., 2012)

GeneSigDB: a manually curated database and resource for analysis of gene expression signatures. - Aedín C. Culhane; Markus S. Schröder; Razvan Sultana; Shaita C. Picard; Enzo N. Martinelli; Caroline Kelly; Benjamin Haibe-Kains; Misha Kapushesky; Anne-Alyssa St Pierre; William Flahive; Kermshlise C. Picard; Daniel Gusenleitner; et al. (Nucleic Acids Res., 2012)