IntFOLD: an integrated web resource for high performance protein structure and function prediction. - Liam J. McGuffin; Recep Adiyaman; Ali H. A. Maghrabi; Ahmad N. Shuid; Danielle A. Brackenridge; John O. Nealon; Limcy S. Philomina (Nucleic Acids Res., 2019)

ReFOLD3: refinement of 3D protein models with gradual restraints based on predicted local quality and residue contacts. - Recep Adiyaman; Liam J. McGuffin (Nucleic Acids Res., 2021)

ModFOLD8: accurate global and local quality estimates for 3D protein models. - Liam J. McGuffin; Fahd M. F. Aldowsari; Shuaa M. A Alharbi; Recep Adiyaman (Nucleic Acids Res., 2021)

Prediction of protein structures, functions and interactions using the IntFOLD7, MultiFOLD and ModFOLDdock servers. - Liam J. McGuffin; Nicholas S. Edmunds; Ahmet G. Genc; Shuaa M. A Alharbi; Bajuna R. Salehe; Recep Adiyaman (Nucleic Acids Res., 2023)