Understanding Protein Networks Using Vester's Sensitivity Model. - Liana Amaya Moreno; Maryam Omidi; Marcus Wurlitzer; Bérengère Luthringer; Heike Helmholz; Hartmut Schlüter; Regine Willumeit-Römer; Armin Fügenschuh (IEEE ACM Trans. Comput. Biol. Bioinform., 2020)

Abstract: Verbesserung des 2D U-Nets für die 3D Mikrotomographie mit Synchrotronstrahlung mittels Multi-Axes Fusing. - Ivo M. Baltruschat; Hanna Cwieka; Diana Krüger; Berit Zeller-Plumhoff; Frank Schlünzen; Regine Willumeit-Römer; Julian Moosmann; Philipp Heuser (Bildverarbeitung für die Medizin, 2022)

CppyABM: An open-source agent-based modeling library to integrate C++ and Python. - Jalil Nourisa; Berit Zeller-Plumhoff; Regine Willumeit-Römer (Softw. Pract. Exp., 2022)

The osteogenetic activities of mesenchymal stem cells in response to Mg2+ ions and inflammatory cytokines: a numerical approach using fuzzy logic controllers. - Jalil Nourisa; Berit Zeller-Plumhoff; Regine Willumeit-Römer (PLoS Comput. Biol., 2022)

An ontology-based description of nano computed tomography measurements in electronic laboratory notebooks: from metadata schema to first user experience. - Fabian Kirchner; D. C. Florian Wieland; Sarah Irvine; Sven Schimek; Jan Reimers; Rossella Aversa; Alexey Boubnov; Christian Lucas; Silja Flenner; Imke Greving; André Lopes Marinho; Tak Ming Wong; et al. (CoRR, 2025)

ELNdataBridge: facilitating data exchange and collaboration by linking Electronic Lab Notebooks via API. - Martin Starman; Fabian Kirchner; Martin Held; Catriona Eschke; Sayed-Ahmad Sahim; Regine Willumeit-Römer; Nicole Jung; Stefan Bräse (J. Cheminformatics, 2025)