Reinhard Schneider

According to our database1, Reinhard Schneider authored at least 59 papers between 1992 and 2020.

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Bibliography

2020
LAITOR4HPC: A text mining pipeline based on HPC for building interaction networks.
BMC Bioinform., 2020

Closing the gap between formats for storing layout information in systems biology.
Briefings Bioinform., 2020

2019
The Virtual Metabolic Human database: integrating human and gut microbiome metabolism with nutrition and disease.
Nucleic Acids Res., 2019

Data and knowledge management in translational research: implementation of the eTRIKS platform for the IMI OncoTrack consortium.
BMC Bioinform., 2019

MINERVA API and plugins: opening molecular network analysis and visualization to the community.
Bioinform., 2019

Community-driven roadmap for integrated disease maps.
Briefings Bioinform., 2019

2018
Evolutionary Algorithms for the Inverse Protein Folding Problem.
Proceedings of the Handbook of Heuristics., 2018

Clustering approaches for visual knowledge exploration in molecular interaction networks.
BMC Bioinform., 2018

MolArt: a molecular structure annotation and visualization tool.
Bioinform., 2018

2017
ARTENOLIS: Automated Reproducibility and Testing Environment for Licensed Software.
CoRR, 2017

ReconMap: an interactive visualization of human metabolism.
Bioinform., 2017

SmartR: an open-source platform for interactive visual analytics for translational research data.
Bioinform., 2017

2016
Integration and Visualization of Translational Medicine Data for Better Understanding of Human Diseases.
Big Data, 2016

2015
BioTextQuest+: a knowledge integration platform for literature mining and concept discovery.
Bioinform., 2015

RepExplore: addressing technical replicate variance in proteomics and metabolomics data analysis.
Bioinform., 2015

A Novel Multi-objectivisation Approach for Optimising the Protein Inverse Folding Problem.
Proceedings of the Applications of Evolutionary Computation - 18th European Conference, 2015

2014
The HIV Mutation Browser: A Resource for Human Immunodeficiency Virus Mutagenesis and Polymorphism Data.
PLoS Comput. Biol., 2014

PredictProtein - an open resource for online prediction of protein structural and functional features.
Nucleic Acids Res., 2014

BioTextQuest<sup>+</sup>: a knowledge integration platform for literature mining and concept discovery.
Bioinform., 2014

COMPARTMENTS: unification and visualization of protein subcellular localization evidence.
Database J. Biol. Databases Curation, 2014

Visualizing time-related data in biology, a review.
Briefings Bioinform., 2014

2013
iAnn: an event sharing platform for the life sciences.
Bioinform., 2013

Unraveling genomic variation from next generation sequencing data.
BioData Min., 2013

OnTheFly 2.0: A tool for automatic annotation of files and biological information extraction.
Proceedings of the 13th IEEE International Conference on BioInformatics and BioEngineering, 2013

2012
How Not to Be a Bioinformatician.
Source Code Biol. Medicine, 2012

Bioinformatics as a driver, not a passenger, of translational biomedical research: Perspectives from the 6<sup>th </sup>Benelux bioinformatics conference.
J. Clin. Bioinform., 2012

Arena3D: visualizing time-driven phenotypic differences in biological systems.
BMC Bioinform., 2012

A bioinformatics e-dating story: computational prediction and prioritization of receptor-ligand pairs.
BMC Bioinform., 2012

Paving the future: finding suitable ISMB venues.
Bioinform., 2012

ReLiance: a machine learning and literature-based prioritization of receptor - ligand pairings.
Bioinform., 2012

PathVar: analysis of gene and protein expression variance in cellular pathways using microarray data.
Bioinform., 2012

EnrichNet: network-based gene set enrichment analysis.
Bioinform., 2012

Caipirini: using gene sets to rank literature.
BioData Min., 2012

HPCS 2012 panels: Panel I: Energy efficient systems in next generation high performance data and compute centers.
Proceedings of the 2012 International Conference on High Performance Computing & Simulation, 2012

2011
A series of PDB related databases for everyday needs.
Nucleic Acids Res., 2011

Using graph theory to analyze biological networks.
BioData Min., 2011

2010
Reflect: A practical approach to web semantics.
J. Web Semant., 2010

Live Coverage of Scientific Conferences Using Web Technologies.
PLoS Comput. Biol., 2010

Live Coverage of Intelligent Systems for Molecular Biology/European Conference on Computational Biology (ISMB/ECCB) 2009.
PLoS Comput. Biol., 2010

LAITOR - Literature Assistant for Identification of Terms co-Occurrences and Relationships.
BMC Bioinform., 2010

GPCRs, G-proteins, effectors and their interactions: human-gpDB, a database employing visualization tools and data integration techniques.
Database J. Biol. Databases Curation, 2010

A reference guide for tree analysis and visualization.
BioData Min., 2010

2009
GIBA: a clustering tool for detecting protein complexes.
BMC Bioinform., 2009

OnTheFly: a tool for automated document-based text annotation, data linking and network generation.
Bioinform., 2009

jClust: a clustering and visualization toolbox.
Bioinform., 2009

2008
SuperTarget and Matador: resources for exploring drug-target relationships.
Nucleic Acids Res., 2008

Arena3D: visualization of biological networks in 3D.
BMC Syst. Biol., 2008

Clustering of cognate proteins among distinct proteomes derived from multiple links to a single seed sequence.
BMC Bioinform., 2008

A survey of visualization tools for biological network analysis.
BioData Min., 2008

1998
The HSSP database of protein structure-sequence alignments and family profiles.
Nucleic Acids Res., 1998

1997
The HSSP database of protein structure-sequence alignments.
Nucleic Acids Res., 1997

Sequence analysis of the Methanococcus jannaschii genome and the prediction of protein function.
Comput. Appl. Biosci., 1997

1996
The HSSP database of protein structure-sequence alignments.
Nucleic Acids Res., 1996

1994
Sequenz und Sequenz-Struktur: Vergleiche und deren Anwendung für die Struktur- und Funktionsvorhersage von Proteinen.
PhD thesis, 1994

PHD - an automatic mail server for protein secondary structure prediction.
Comput. Appl. Biosci., 1994

GeneQuiz: A Workbench for Sequence Analysis.
Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, 1994

Evolution and Neural Networks - Protein Secondary Structure Prediction Above 71% Accuracy.
Proceedings of the 27th Annual Hawaii International Conference on System Sciences (HICSS-27), 1994

1993
The HSSP data base of protein structure-sequence alignments.
Nucleic Acids Res., 1993

1992
The Human Genome and High Performance Computing in Molecular Biology.
Proceedings of the Supercomputer'92: Anwendungen, Architekturen, Trends, 1992


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