RecPhyloXML: a format for reconciled gene trees. - Wandrille Duchemin; Guillaume Gence; Anne-Muriel Arigon Chifolleau; Lars Arvestad; Mukul S. Bansal; Vincent Berry; Bastien Boussau; François Chevenet; Nicolas Comte; Adrián A. Davín; Christophe Dessimoz; David Dylus; et al. (Bioinform., 2018)

MicroScope - an integrated resource for community expertise of gene functions and comparative analysis of microbial genomic and metabolic data. - Claudine Médigue; Alexandra Calteau; Stéphane Cruveiller; Mathieu Gachet; Guillaume Gautreau; Adrien Josso; Aurélie Lajus; Jordan Langlois; Hugo Pereira; Rémi Planel; David Roche; Johan Rollin; et al. (Briefings Bioinform., 2019)

MicroScope: an integrated platform for the annotation and exploration of microbial gene functions through genomic, pangenomic and metabolic comparative analysis. - David Vallenet; Alexandra Calteau; Mathieu Dubois; Paul Amours; Adelme Bazin; Mylène Beuvin; Laura Burlot; Xavier Bussell; Stéphanie Fouteau; Guillaume Gautreau; Aurélie Lajus; Jordan Langlois; et al. (Nucleic Acids Res., 2020)

PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph. - Guillaume Gautreau; Adelme Bazin; Mathieu Gachet; Rémi Planel; Laura Burlot; Mathieu Dubois; Amandine Perrin; Claudine Médigue; Alexandra Calteau; Stéphane Cruveiller; Catherine Matias; Christophe Ambroise; et al. (PLoS Comput. Biol., 2020)

Correction: PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph. - Guillaume Gautreau; Adelme Bazin; Mathieu Gachet; Rémi Planel; Laura Burlot; Mathieu Dubois; Amandine Perrin; Claudine Médigue; Alexandra Calteau; Stéphane Cruveiller; Catherine Matias; Christophe Ambroise; et al. (PLoS Comput. Biol., 2021)