Process Matchmaking on a P2P Environment. - Remzi Celebi; Huseyin Ellezer; Cem Baylam; Ibrahim Cereci; Hürevren Kiliç (IAT Workshops, 2006)

Using linked open data to bootstrap corporate knowledge management in the OrganiK project. - Gunnar Aastrand Grimnes; Remzi Celebi; Leo Sauermann (I-SEMANTICS, 2010)

Mobile Prisoner's Dilemma game played on diverse habitats. - Remzi Celebi; Hürevren Kiliç (IEEE Congress on Evolutionary Computation, 2011)

Weighting Indirect Relations to Elucidate the Direct Association of SNP-Disease by Use of SPARQL Queries. - Remzi Çelebi; Özgür Gümüs; Yedim Aysin Son (SWAT4LS, 2013)

Prediction of Drug-Drug Interactions Using Pharmacological Similarities of Drugs. - Remzi Çelebi; Vahab Mostafapour; Erkan Yasar; Özgür Gümüs; Oguz Dikenelli (DEXA Workshops, 2015)

Machine Learning Based Drug Indication Prediction Using Linked Open Data. - Remzi Çelebi; Özgün Erten; Michel Dumontier (SWAT4LS, 2017)

Evaluation of knowledge graph embedding approaches for drug-drug interaction prediction using Linked Open Data. - Remzi Çelebi; Erkan Yasar; Hüseyin Uyar; Özgür Gümüs; Oguz Dikenelli; Michel Dumontier (SWAT4LS, 2018)

Biyomedikal bilgi çizgeleri için makine öğrenmesi tabanlı anlamsal bağ tahmini (Machine learning based semantic link prediction for biomedical knowledge graphs) - Remzi Çelebi (2018)

Fact Validation with Knowledge Graph Embeddings. - Ammar Ammar; Remzi Celebi (ISWC (Satellites), 2019)

Evaluation of knowledge graph embedding approaches for drug-drug interaction prediction in realistic settings. - Remzi Celebi; Hüseyin Uyar; Erkan Yasar; Özgür Gümüs; Oguz Dikenelli; Michel Dumontier (BMC Bioinform., 2019)

Towards FAIR protocols and workflows: The OpenPREDICT case study. - Remzi Celebi; Joao Rebelo Moreira; Ahmed A. Hassan; Sandeep Ayyar; Lars Ridder; Tobias Kuhn; Michel Dumontier (CoRR, 2019)

A Methodology for Hierarchical Classification of Semantic Answer Types of Questions. - Ammar Ammar; Shervin Mehryar; Remzi Celebi (SMART@ISWC, 2020)

Towards FAIR protocols and workflows: the OpenPREDICT use case. - Remzi Celebi; Joao Rebelo Moreira; Ahmed A. Hassan; Sandeep Ayyar; Lars Ridder; Tobias Kuhn; Michel Dumontier (PeerJ Comput. Sci., 2020)

User-friendly Composition of FAIR Workflows in a Notebook Environment. - Robin A. Richardson; Remzi Celebi; Sven van der Burg; Djura Smits; Lars Ridder; Michel Dumontier; Tobias Kuhn (K-CAP, 2021)

Semantic Answer Type Prediction by Using BERT classifier and Rule-based Ranking Strategies. - Xiao Ning; Ammar Ammar; Arif Yilmaz; Shervin Mehryar; Remzi Celebi (SMART@ISWC, 2021)

Relation extraction from DailyMed structured product labels by optimally combining crowd, experts and machines. - Krist Shingjergji; Remzi Celebi; Jan C. Scholtes; Michel Dumontier (J. Biomed. Informatics, 2021)

Knowledge Base Construction from Pre-trained Language Models by Prompt learning. - Xiao Ning; Remzi Celebi (LM-KBC@ISWC, 2022)

Improving Transitive Embeddings in Neural Reasoning Tasks via Knowledge-Based Policy Networks (full paper). - Shervin Mehryar; Remzi Celebi (SemREC/SMART@ISWC, 2022)

Nanotate: Semantically Annotating Experimental Protocols with Nanopublications. - Olga L. Giraldo; Miguel Ruano; Robin A. Richardson; Remzi Celebi; Michel Dumontier; Tobias Kuhn (SWAT4HCLS, 2022)

Automated Identification of Food Substitutions Using Knowledge Graph Embeddings. - Julie Loesch; Louis Meeckers; Ilse van Lier; Alie de Boer; Michel Dumontier; Remzi Celebi (SWAT4HCLS, 2022)

Expanding the Vocabulary of BERT for Knowledge Base Construction. - Dong Yang; Xu Wang; Remzi Celebi (KBC-LM/LM-KBC@ISWC, 2023)

Enhanced GAT: Expanding Receptive Field with Meta Path-Guided RDF Rules for Two-Hop Connectivity. - Julie Loesch; Michel Dumontier; Remzi Celebi (QALD/SemREC@ISWC, 2023)

Semantic Annotation of Tabular Data for Machine-to-Machine Interoperability via Neuro-Symbolic Anchoring. - Shervin Mehryar; Remzi Celebi (SemTab@ISWC, 2023)

Predicting missing annotations in Gene Ontology with Knowledge Graph Embeddings and True Path Rule. - Özge Erten; Shervin Mehryar; Remzi Çelebi; Christopher Brewster (SWAT4HCLS, 2023)

Generating Knowledge Graph Based Explanations for Drug Repurposing Predictions. - Elif Ozkan; Remzi Celebi; Arif Yilmaz; Vincent Emonet; Michel Dumontier (SWAT4HCLS, 2023)

TAPS Responsibility Matrix: A tool for responsible data science by design. - Visara Urovi; Remzi Celebi; Chang Sun 001; Linda Rieswijk; Michael Erard; Arif Yilmaz; Kody Moodley; Parveen Kumar; Michel Dumontier (CoRR, 2023)

From Clinical Information Systems to Personalized Health Knowledge Graphs. - Sareh Aghaei Dinani; Remzi Celebi; Markus Kreuzthaler; Stefan Schulz 001 (MIE, 2024)

Construction of a knowledge graph for food health claims. - Remzi Celebi; Ilse van Lier; Alie de Boer; Michel Dumontier (SWAT4HCLS, 2024)

Refining SemOpenAlex concept ontology: A constraint-aware approach via knowledge graph embeddings and SKOS constraints. - Özge Erten; Shervin Mehryar; Bo Xiong; Remzi Çelebi; Christopher Brewster (SWAT4HCLS, 2024)

Explaining Graph Neural Network predictions for drug repurposing. - Julie Loesch; Yang Yang; Pelinsu Ekmekci; Michel Dumontier; Remzi Celebi (SWAT4HCLS, 2024)