Perm-seq: Mapping Protein-DNA Interactions in Segmental Duplication and Highly Repetitive Regions of Genomes with Prior-Enhanced Read Mapping. - Xin Zeng; Bo Li 015; Rene Welch; Constanza Rojo; Ye Zheng; Colin N. Dewey; Sündüz Keles (PLoS Comput. Biol., 2015)