ESTminer: a suite of programs for gene and allele identification. - Rex T. Nelson; David M. Grant; Randy C. Shoemaker (Bioinform., 2005)

SSWAP: A Simple Semantic Web Architecture and Protocol for semantic web services. - Damian Gessler; Gary S. Schiltz; Gregory D. May; Shulamit Avraham; Christopher D. Town; David M. Grant; Rex T. Nelson (BMC Bioinform., 2009)

Applications and methods utilizing the Simple Semantic Web Architecture and Protocol (SSWAP) for bioinformatics resource discovery and disparate data and service integration. - Rex T. Nelson; Shulamit Avraham; Randy C. Shoemaker; Gregory D. May; Doreen Ware; Damian Gessler (BioData Min., 2010)

SoyBase, the USDA-ARS soybean genetics and genomics database. - David M. Grant; Rex T. Nelson; Steven B. Cannon; Randy C. Shoemaker (Nucleic Acids Res., 2010)

Towards a Reference Plant Trait Ontology for Modeling Knowledge of Plant Traits and Phenotypes. - Elizabeth Arnaud; Laurel Cooper; Rosemary Shrestha; Naama Menda; Rex T. Nelson; Luca Matteis; Milko Skofic; Ruth Bastow; Pankaj Jaiswal; Lukas A. Mueller; Graham McLaren (KEOD, 2012)

AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture. - Lisa C. Harper; Jacqueline D. Campbell; Ethalinda K. S. Cannon; Sook Jung; Monica Poelchau; Ramona L. Walls; Carson M. Andorf; Elizabeth Arnaud; Tanya Z. Berardini; Clayton L. Birkett; Steven B. Cannon; James D. Carson; et al. (Database J. Biol. Databases Curation, 2018)

Ten quick tips for sharing open genomic data. - Anne V. Brown; Jacqueline D. Campbell; Teshale Assefa; David M. Grant; Rex T. Nelson; Nathan T. Weeks; Steven B. Cannon (PLoS Comput. Biol., 2018)

A new decade and new data at SoyBase, the USDA-ARS soybean genetics and genomics database. - Anne V. Brown; Shawn I. Conners; Wei Huang; Andrew P. Wilkey; David M. Grant; Nathan T. Weeks; Steven B. Cannon; Michelle A. Graham; Rex T. Nelson (Nucleic Acids Res., 2021)

Data sharing and ontology use among agricultural genetics, genomics, and breeding databases and resources of the Agbiodata Consortium. - Jennifer L. Clarke; Laurel D. Cooper; Monica F. Poelchau; Tanya Z. Berardini; Justin Elser; Andrew D. Farmer; Stephen P. Ficklin; Sunita Kumari; Marie-Angélique Laporte; Rex T. Nelson; Rie Sadohara; Peter Selby; et al. (Database J. Biol. Databases Curation, 2023)