Planning Considerations for a Roving Robot with Arm. - Richard A. Lewis; Antal K. Bejczy (IJCAI, 1973)

Determination of clefts in receptor structures. - Richard A. Lewis (J. Comput. Aided Mol. Des., 1989)

Automated site-directed drug design: Approaches to the formation of 3D molecular graphs. - Richard A. Lewis (J. Comput. Aided Mol. Des., 1990)

Stable and Robust Solution of Trigonometric Equations. - Richard A. Lewis (Comput. Chem., 1992)

Current methods for site-directed structure generation. - Richard A. Lewis; Andrew R. Leach (J. Comput. Aided Mol. Des., 1994)

A Ring-Bracing Approach to Computer-Assisted Ligand Design. - Andrew R. Leach; Richard A. Lewis (J. Comput. Chem., 1994)

Similarity Measures for Rational Set Selection and Analysis of Combinatorial Libraries: The Diverse Property-Derived (DPD) Approach. - Richard A. Lewis; Jonathan S. Mason; Iain M. McLay (J. Chem. Inf. Comput. Sci., 1997)

Rational Screening Set Design and Compound Selection: Cascaded Clustering. - Paul R. Menard; Richard A. Lewis; Jonathan S. Mason (J. Chem. Inf. Comput. Sci., 1998)

Three-Dimensional Quantitative Structure-Permeability Relationship Analysis for a Series of Inhibitors of Rhinovirus Replication. - Sean Ekins; Gregory L. Durst; Robert E. Stratford; David A. Thorner; Richard A. Lewis; Richard J. Loncharich; James H. Wikel (J. Chem. Inf. Comput. Sci., 2001)

Generation and Display of Activity-Weighted Chemical Hyperstructures. - Nathan Brown; Peter Willett 002; David J. Wilton; Richard A. Lewis (J. Chem. Inf. Comput. Sci., 2003)

Applied Simulation Modeling. - Richard A. Lewis (Technometrics, 2004)

Comparison of Conformational Analysis Techniques To Generate Pharmacophore Hypotheses Using Catalyst. - Rajendra Kristam; Valerie J. Gillet; Richard A. Lewis; David A. Thorner (J. Chem. Inf. Model., 2005)

Making sure there's a "give" associated with the "take": producing and using open-source software in big pharma. - Gregory A. Landrum; Richard A. Lewis; Andrew Palmer; Nikolaus Stiefl; Anna Vulpetti (J. Cheminformatics, 2011)

FOCUS - Development of a Global Communication and Modeling Platform for Applied and Computational Medicinal Chemists. - Nikolaus Stiefl; Peter Gedeck; Donovan Chin; Peter Hunt; Mika K. Lindvall; Katrin Spiegel; Clayton Springer; Scott Biller; Christoph L. Buenemann; Takanori Kanazawa; Mitsunori Kato; Richard A. Lewis; et al. (J. Chem. Inf. Model., 2015)

Collaborating to improve the use of free-energy and other quantitative methods in drug discovery. - Bradley Sherborne; Veerabahu Shanmugasundaram; Alan C. Cheng; Clara D. Christ; Renee L. DesJarlais; José S. Duca; Richard A. Lewis; Deborah A. Loughney; Eric S. Manas; Georgia B. McGaughey; Catherine E. Peishoff; Herman van Vlijmen (J. Comput. Aided Mol. Des., 2016)

Advanced Editorial to announce a JCAMD Special Issue on Artificial Intelligence and Machine Learning. - Daniel Reker; Richard A. Lewis (J. Comput. Aided Mol. Des., 2019)

Artificial intelligence in chemistry and drug design. - Nathan Brown; Peter Ertl; Richard A. Lewis; Torsten Luksch; Daniel Reker; Nadine Schneider (J. Comput. Aided Mol. Des., 2020)

D3R grand challenge 4: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies. - Conor D. Parks; Zied Gaieb; Michael Chiu; Huanwang Yang; Chenghua Shao; W. Patrick Walters; Johanna M. Jansen; Georgia B. McGaughey; Richard A. Lewis; Scott D. Bembenek; Michael K. Ameriks; Tara Mirzadegan; et al. (J. Comput. Aided Mol. Des., 2020)

Best practices for repurposing studies. - Richard A. Lewis (J. Comput. Aided Mol. Des., 2021)

Predicting In Vivo Compound Brain Penetration Using Multi-task Graph Neural Networks. - Seid Hamzic; Richard A. Lewis; Sandrine Desrayaud; Cihan Soylu; Mike Fortunato; Grégori Gerebtzoff; Raquel Rodríguez-Pérez (J. Chem. Inf. Model., 2022)

PREFER: A New Predictive Modeling Framework for Molecular Discovery. - Jessica Lanini; Gianluca Santarossa; Finton Sirockin; Richard A. Lewis; Nikolas Fechner; Hubert Misztela; Sarah Lewis; Krzysztof Maziarz; Megan Stanley; Marwin H. S. Segler; Nikolaus Stiefl; Nadine Schneider (J. Chem. Inf. Model., 2023)

Enriched phenotypes in rare variant carriers suggest pathogenic mechanisms in rare disease patients. - Lane Fitzsimmons; Maria T. Acosta; David R. Adams; Ben Afzali; Ali Al-Beshri; Eric Allenspach; Aimee Allworth; Raquel L. Alvarez; Justin Alvey; Ashley Andrews; Euan A. Ashley; Carlos A. Bacino; et al. (BioData Min., 2025)

The Need for Continuing Blinded Pose- and Activity Prediction Benchmarks. - Christian Kramer; John D. Chodera; Kelly L. Damm-Ganamet; Michael K. Gilson; Judith Guenther; Uta F. Lessel; Richard A. Lewis; David L. Mobley; Eva Nittinger; Adam Pecina; Matthieu Schapira; W. Patrick Walters (J. Chem. Inf. Model., 2025)