Microarrays expression measurement. - Richard D. Pearson (BMC Syst. Biol., 2007)

A comprehensive re-analysis of the Golden Spike data: Towards a benchmark for differential expression methods. - Richard D. Pearson (BMC Bioinform., 2008)

puma: a Bioconductor package for propagating uncertainty in microarray analysis. - Richard D. Pearson; Xuejun Liu; Guido Sanguinetti; Marta Milo; Neil D. Lawrence; Magnus Rattray (BMC Bioinform., 2009)

Metabolic network analysis predicts efficacy of FDA-approved drugs targeting the causative agent of a neglected tropical disease. - Arvind K. Chavali; Anna S. Blazier; Jose L. Tlaxca; Paul A. Jensen; Richard D. Pearson; Jason A. Papin (BMC Syst. Biol., 2012)