An extensible object-oriented mixed-mod functional simulation system. - Richard H. Lathrop; Robert S. Kirk (DAC, 1985)

Parallelism in manipulator dynamics. - Richard H. Lathrop (ICRA, 1985)

A System Which Uses Examples to Learn VLSI Structure Manipulations. - Richard H. Lathrop; Robert S. Kirk (AAAI, 1986)

Precedent-based manipulation of VLSI structures. - Richard H. Lathrop; Robert S. Kirk (DAC, 1986)

Constrained (closed-loop) robot simulation by local constraint propagation. - Richard H. Lathrop (ICRA, 1986)

A Multiple Representation Approach to Understanding the Time Behavior of Digital Circuits. - Robert J. Hall 001; Richard H. Lathrop; Robert S. Kirk (AAAI, 1987)

Functional Abstraction from Structure in VLSI Simulation Models. - Richard H. Lathrop; Robert J. Hall 001; Robert S. Kirk (DAC, 1987)

ARIADNE: Pattern-Directed Inference and Hierarchical Abstraction in Protein Structure Recognition. - Richard H. Lathrop; Teresa A. Webster; Temple F. Smith (Commun. ACM, 1987)

Advances in Functional Abstraction from Structure. - Richard H. Lathrop; Robert J. Hall 001; Gavan Duffy; K. Mark Alexander; Robert S. Kirk (DAC, 1988)

A Comparison of Dynamic Reposing and Tangent Distance for Drug Activity Prediction. - Thomas G. Dietterich; Ajay N. Jain; Richard H. Lathrop; Tomás Lozano-Pérez (NIPS, 1993)

Massively Parallel Symbolic Induction of Protein Structure/Function Relationships. - Richard H. Lathrop; Teresa A. Webster; Temple F. Smith; Patrick H. Winston (Machine Learning: From Theory to Applications, 1993)

Protein Structure Prediction: Introductios. - A. Keith Dunker; Richard H. Lathrop (HICSS (5), 1994)

A Branch-and-Bound Algorithm for Optimal Protein Threading with Pairwise (Contact Potential) Amino Acid Interactions. - Richard H. Lathrop; Temple F. Smith (HICSS (5), 1994)

Compass: A shape-based machine learning tool for drug design. - Ajay N. Jain; Thomas G. Dietterich; Richard H. Lathrop; David Chapman; Roger E. Critchlow Jr.; Barr E. Bauer; Teresa A. Webster; Tomás Lozano-Pérez (J. Comput. Aided Mol. Des., 1994)

On the Learnability of the Uncomputable. - Richard H. Lathrop (ICML, 1996)

From Electron Density and Sequence to Structure: Integrating Protein Image Analysis and Threading for Structure Determination. - Kim Baxter; Evan W. Steeg; Richard H. Lathrop; Janice I. Glasgow; Suzanne Fortier (ISMB, 1996)

The threading approach to the inverse protein folding problem. - Temple F. Smith; Loredana Lo Conte; Jadwiga R. Bienkowska; Robert G. Rogers; Chrysanthe Gaitatzes; Richard H. Lathrop (RECOMB, 1997)

Solving the Multiple Instance Problem with Axis-Parallel Rectangles. - Thomas G. Dietterich; Richard H. Lathrop; Tomás Lozano-Pérez (Artif. Intell., 1997)

Current Limitations to Protein Threading Approaches. - Temple F. Smith; Loredana Lo Conte; Jadwiga R. Bienkowska; Chrysanthe Gaitatzes; Robert G. Rogers; Richard H. Lathrop (J. Comput. Biol., 1997)

Modeling Protein Homopolymeric Repeats: Possible Polyglutamine Structural Motifs for Huntington's Disease. - Richard H. Lathrop; Malcolm S. Casale; Douglas J. Tobias; J. Lawrence Marsh; Leslie M. Thompson (ISMB, 1998)

Protein Structure Prediction - Session Introduction. - Jeffrey Skolnick; Richard H. Lathrop (Pacific Symposium on Biocomputing, 1999)

An anytime algorithm for gapped block protein threading with pair interactions. - Richard H. Lathrop (RECOMB, 1999)

Knowledge-Based Avoidance of Drug-Resistant HIV Mutants. - Richard H. Lathrop; Nicholas R. Steffen; Miriam P. Raphael; Sophia Deeds-Rubin; Michael J. Pazzani; Paul J. Cimoch; Darryl M. See; Jeremiah G. Tilles (AI Mag., 1999)

An Anytime Local-to-Global Optimization Algorithm for Protein Threading in O(m2n2) Space. - Richard H. Lathrop (J. Comput. Biol., 1999)

Combinatorial Optimization in Rapidly Mutating Drug-Resistant Viruses. - Richard H. Lathrop; Michael J. Pazzani (J. Comb. Optim., 1999)

DNA Structure, Protein-DNA Interactions, and DNA-Protein Expression - Session Introduction. - Pierre Baldi; Richard H. Lathrop (Pacific Symposium on Biocomputing, 2001)

Guest Editor's Introduction-Intelligent Systems in Biology: Why the Excitement? - Richard H. Lathrop (IEEE Intell. Syst., 2001)

DNA sequence and structure: direct and indirect recognition in protein-DNA binding. - Nicholas R. Steffen; S. D. Murphy; L. Tolleri; G. Wesley Hatfield; Richard H. Lathrop (ISMB, 2002)

Guest Editors' Introduction-Computer Science and Biology: An Unlikely Pair. - Lawrence Hunter; Richard H. Lathrop (IEEE Intell. Syst., 2002)

Biomedical Artificial Intelligence. - Richard H. Lathrop (PRICAI, 2004)

Functional Census of Mutation Sequence Spaces: The Example of p53 Cancer Rescue Mutants. - Samuel A. Danziger; Sanjay Joshua Swamidass; Jue Zeng; Lawrence R. Dearth; Qiang Lu; Jonathan H. Chen; Jianlin Cheng; Vinh P. Hoang; Hiroto Saigo; Ray Luo 001; Pierre Baldi; Rainer K. Brachmann; et al. (IEEE ACM Trans. Comput. Biol. Bioinform., 2006)

Choosing where to look next in a mutation sequence space: Active Learning of informative p53 cancer rescue mutants. - Samuel A. Danziger; Jue Zeng; Ying Wang; Rainer K. Brachmann; Richard H. Lathrop (ISMB/ECCB (Supplement of Bioinformatics), 2007)

DNA Deformation Energy as an Indirect Recognition Mechanism in Protein-DNA Interactions. - Kimberly A. Aeling; Nicholas R. Steffen; Matthew Johnson 009; G. Wesley Hatfield; Richard H. Lathrop; Donald F. Senear (IEEE ACM Trans. Comput. Biol. Bioinform., 2007)

Computationally Optimised DNA Assembly of synthetic genes. - Liza S. Z. Larsen; Christopher D. Wassman; G. Wesley Hatfield; Richard H. Lathrop (Int. J. Bioinform. Res. Appl., 2008)

Predicting Positive p53 Cancer Rescue Regions Using Most Informative Positive (MIP) Active Learning. - Samuel A. Danziger; Roberta Baronio; Lydia Ho; Linda Hall; Kirsty Salmon; G. Wesley Hatfield; Peter Kaiser; Richard H. Lathrop (PLoS Comput. Biol., 2009)

p53 Mutants. - Richard H. Lathrop (UCI Machine Learning Repository, 2010)

Ensemble-Based Computational Approach Discriminates Functional Activity of p53 Cancer and Rescue Mutants. - Özlem Demir; Roberta Baronio; Faezeh Salehi; Christopher D. Wassman; Linda Hall; G. Wesley Hatfield; Richard Chamberlin; Peter Kaiser; Richard H. Lathrop; Rommie E. Amaro (PLoS Comput. Biol., 2011)

ISCB Public Policy Statement on Open Access to Scientific and Technical Research Literature. - Richard H. Lathrop; Burkhard Rost (PLoS Comput. Biol., 2011)