Linking genotype to phenotype: the International Rice Information System (IRIS). - Richard M. Bruskiewich; Alexander B. Cosico; William Eusebio; Arllet M. Portugal; Luralyn M. Ramos; Ma. Teresa Reyes; May Ann B. Sallan; Victor Jun M. Ulat; Xusheng Wang; Kenneth L. McNally; Ruaraidh Sackville Hamilton; Christopher Graham McLaren (ISMB (Supplement of Bioinformatics), 2003)

Guest Editor Preface: Plant & Animal Genome (PAG) Meeting Bioinformatics Session Paper Competition. - Richard M. Bruskiewich (Bioinform., 2004)

Transposable element annotation of the rice genome. - Nikoleta Juretic; Thomas E. Bureau; Richard M. Bruskiewich (Bioinform., 2004)

The Generation Challenge Programme Model Driven Architecture: Scientific Domain Model and Ontology. - Genevieve Mae Aquino; Jeffrey Detras; Rosemary Shrestha; Martin Senger; Kevin Manansala; Elizabeth Arnaud; Reinhard Simon; Jayashree Balaiji; Thomas Hazekamp; Guy Davenport; Graham McLaren; Theo J. L. van Hintum; et al. (SWAT4LS, 2008)

Revealing sequence variation patterns in rice with machine learning methods. - Regina Bohnert; Georg Zeller; Richard M. Clark; Kevin L. Childs; Victor Jun M. Ulat; Renee Stokowski; Dennis Ballinger; Kelly Frazer; David Cox; Richard M. Bruskiewich; C. Robin Buell; Jan Leach; et al. (BMC Bioinform., 2008)

The Generation Challenge Programme comparative plant stress-responsive gene catalogue. - Samart Wanchana; Supat Thongjuea; Victor Jun M. Ulat; Mylah Anacleto; Ramil Mauleon; Matthieu G. Conte; Mathieu Rouard; Manuel Ruiz; Nandini Krishnamurthy; Kimmen Sjölander; Theo J. L. van Hintum; Richard M. Bruskiewich (Nucleic Acids Res., 2008)

RiceGeneThresher: a web-based application for mining genes underlying QTL in rice genome. - Supat Thongjuea; Vinitchan Ruanjaichon; Richard M. Bruskiewich; Apichart Vanavichit (Nucleic Acids Res., 2009)

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. - Toshiaki Katayama; Kazuharu Arakawa; Mitsuteru Nakao; Keiichiro Ono; Kiyoko F. Aoki-Kinoshita; Yasunori Yamamoto; Atsuko Yamaguchi; Shuichi Kawashima; Hong-Woo Chun; Jan Aerts; Bruno Aranda; Lord H. Barboza; et al. (J. Biomed. Semant., 2010)

The Linked Data Modeling Language (LinkML): A General-Purpose Data Modeling Framework Grounded in Machine-Readable Semantics. - Sierra A. T. Moxon; Harold Solbrig; Deepak R. Unni; Dazhi Jiao; Richard M. Bruskiewich; James P. Balhoff; Gaurav Vaidya; William D. Duncan; Harshad Hegde; Mark A. Miller; Matthew H. Brush; Nomi L. Harris; et al. (ICBO, 2021)

Biolink Model: A Universal Schema for Knowledge Graphs in Clinical, Biomedical, and Translational Science. - Deepak R. Unni; Sierra A. T. Moxon; Michael Bada; Matthew H. Brush; Richard M. Bruskiewich; Paul A. Clemons; Vlado Dancík; Michel Dumontier; Karamarie Fecho; Gustavo Glusman; Jennifer J. Hadlock; Nomi L. Harris; et al. (CoRR, 2022)

KG-Hub - Building and Exchanging Biological Knowledge Graphs. - J. Harry Caufield; Tim E. Putman; Kevin Schaper; Deepak R. Unni; Harshad Hegde; Tiffany J. Callahan; Luca Cappelletti; Sierra A. T. Moxon; Vida Ravanmehr; Seth Carbon; Lauren E. Chan; Katherina Cortes; et al. (CoRR, 2023)