Reconstruction algorithms for limited view projection data. - Constantinos E. Goutis; Richard M. Leahy; S. Drossos (ICASSP, 1983)

Spectra using data distribution and covariance modelling. - Costas E. Goutis; Richard M. Leahy; P. G. Cassidy (ICASSP, 1984)

Tomographic and spectral analysis using noise statistics. - Richard M. Leahy; Constantinos E. Goutis; S. Drossos (ICASSP, 1984)

Optimal techniques for constraint based signal restoration and image reconstruction. - Richard M. Leahy; Costas E. Goutis (ICASSP, 1985)

An optimal technique for constraint-based image restoration and reconstruction. - Richard M. Leahy; Constantinos E. Goutis (IEEE Trans. Acoust. Speech Signal Process., 1986)

An Evaluation of Methods for Neuromagnetic Image Reconstruction. - Brian Jeffs; Richard M. Leahy; Manbir Singh (IEEE Trans. Biomed. Eng., 1987)

A nonlinear simplex algorithm for minimum order solutions. - Richard M. Leahy; Brian Jeffs; Zhenyu Wu (ICASSP, 1988)

A new unsupervised hierarchical segmentation algorithm for textured images. - Zhenyu Wu; Richard M. Leahy (ICASSP, 1990)

Multispectral tissue classification of MR images using sensor fusion approaches. - Rae H. Lee; Richard M. Leahy (Image Processing, 1990)

MAP restoration of blurred, photon-limited images via an expectation maximization algorithm. - Thomas J. Hebert; Richard M. Leahy (ICASSP, 1991)

Incorporation of Anatomical MR Data for Improved Dunctional Imaging with PET. - Richard M. Leahy; X. Yan (IPMI, 1991)

Image segmentation via edge contour finding: a graph theoretic approach. - Zhenyu Wu; Richard M. Leahy (CVPR, 1992)

Multiple dipole modeling and localization from spatio-temporal MEG data. - John C. Mosher; Paul S. Lewis; Richard M. Leahy (IEEE Trans. Biomed. Eng., 1992)

Statistic-based MAP image-reconstruction from Poisson data using Gibbs priors. - Thomas J. Hebert; Richard M. Leahy (IEEE Trans. Signal Process., 1992)

Biomagnetic localization from transient quasi-static events. - John C. Mosher; Richard M. Leahy; Paul S. Lewis (ICASSP (1), 1993)

An Optimal Graph Theoretic Approach to Data Clustering: Theory and Its Application to Image Segmentation. - Zhenyu Wu; Richard M. Leahy (IEEE Trans. Pattern Anal. Mach. Intell., 1993)

An approximate method of evaluating the joint likelihood for first-order GMRFs. - Zhenyu Wu; Richard M. Leahy (IEEE Trans. Image Process., 1993)

Matching Deformable Atlas Models to Preprocessed Magnetic Resonance Brain Images. - Stephanie Sandor; Richard M. Leahy (ICIP (3), 1994)

Fast gradient-based methods for Bayesian reconstruction of transmission and emission PET images. - Erkan U. Mumcuoglu; Richard M. Leahy; Simon R. Cherry; Zhenyu Zhou (IEEE Trans. Medical Imaging, 1994)

Determining cardiac velocity fields and intraventricular pressure distribution from a sequence of ultrafast CT cardiac images. - Samuel Moon-Ho Song; Richard M. Leahy; Douglas P. Boyd; Bruce H. Brundage; Sandy Napel (IEEE Trans. Medical Imaging, 1994)

Adaptive filtering of stable processes for active attenuation of impulsive noise. - Richard M. Leahy; Zhenyu Zhou; Yung-Chih Hsu (ICASSP, 1995)

Neuromagnetic source reconstruction. - Paul S. Lewis; John C. Mosher; Richard M. Leahy (ICASSP, 1995)

Matrix kernels for MEG and EEG source localization and imaging. - John C. Mosher; Richard M. Leahy; Paul S. Lewis (ICASSP, 1995)

Approximate maximum likelihood hyperparameter estimation for Gibbs priors. - Zhenyu Zhou; Richard M. Leahy (ICIP, 1995)

Approximate maximum likelihood hyperparameter estimation for Gibbs priors. - Zhenyu Zhou; Richard M. Leahy; Jinyi Qi (IEEE Trans. Image Process., 1997)

MEG-Based Imaging of Focal Neuronal Current Sources. - J. W. Phillips; Richard M. Leahy; John C. Mosher (IEEE Trans. Medical Imaging, 1997)

Surface-Based Labeling of Cortical Anatomy Using a Deformable Atlas. - Stephanie Sandor; Richard M. Leahy (IEEE Trans. Medical Imaging, 1997)

Recursive MUSIC: A framework for EEG and MEG source localization. - John C. Mosher; Richard M. Leahy (IEEE Trans. Biomed. Eng., 1998)

MEG Source Imaging Using Multipolar Expansions. - John C. Mosher; Richard M. Leahy; David W. Shattuck; Sylvain Baillet (IPMI, 1999)

Continuous Time Dynamic PET Imaging Using List Mode Data. - Thomas E. Nichols; Jinyi Qi; Richard M. Leahy (IPMI, 1999)

Fast computation of the covariance of MAP reconstructions of PET images. - Jinyi Qi; Richard M. Leahy (Image Processing, 1999)

Topological refinement of volumetric data. - David W. Shattuck; Richard M. Leahy (Image Processing, 1999)

EEG and MEG: forward solutions for inverse methods. - John C. Mosher; Richard M. Leahy; Paul S. Lewis (IEEE Trans. Biomed. Eng., 1999)

A theoretical study of the contrast recovery and variance of MAP reconstructions from PET data. - Jinyi Qi; Richard M. Leahy (IEEE Trans. Medical Imaging, 1999)

Source localization using recursively applied and projected (RAP) MUSIC. - John C. Mosher; Richard M. Leahy (IEEE Trans. Signal Process., 1999)

Topologically constrained cortical surfaces from MRI. - David W. Shattuck; Richard M. Leahy (Image Processing, 2000)

Optimization method for creating semi-isometric flat maps of the cerebral cortex. - Bijan Timsari; Richard M. Leahy (Image Processing, 2000)

Statistical approaches in quantitative positron emission tomography. - Richard M. Leahy; Jinyi Qi (Stat. Comput., 2000)

Paired MEG data set source localization using recursively applied and projected (RAP) MUSIC. - John J. Ermer; John C. Mosher; Mingxiong Huang; Richard M. Leahy (IEEE Trans. Biomed. Eng., 2000)

Comparison of 3D maximum a posteriori and filtered backprojection algorithms for high resolution animal imaging with microPET. - Arion Chatziioannou; Jinyi Qi; A. Moore; Alex Annala; K. Nguyen; Richard M. Leahy; Simon R. Cherry (IEEE Trans. Medical Imaging, 2000)

Guest Editorial Recent Developments in Iterative Image Reconstruction for PET and SPECT. - Richard M. Leahy; Charles L. Byrne (IEEE Trans. Medical Imaging, 2000)

Resolution and noise properties of MAP reconstruction for fully 3D PET. - Jinyi Qi; Richard M. Leahy (IEEE Trans. Medical Imaging, 2000)

Electromagnetic brain mapping. - Sylvain Baillet; John C. Mosher; Richard M. Leahy (IEEE Signal Process. Mag., 2001)

Automated Graph Based Analysis and Correction of Cortical Volume Topology. - David W. Shattuck; Richard M. Leahy (IEEE Trans. Medical Imaging, 2001)

Multi-modality tomographic image reconstruction using mesh modeling. - Jovan G. Brankov; Yongyi Yang; Richard M. Leahy; Miles N. Wernick (ISBI, 2002)

Automated interictal spike detection and source localization in MEG using ICA and spatial-temporal clustering. - Alexei Ossadtchi; Richard M. Leahy; John C. Mosher; Nancy Lopez; William Sutherling (ISBI, 2002)

Segmentation of the skull in 3D human MR images using mathematical morphology. - Belma Dogdas; David W. Shattuck; Richard M. Leahy (Image Processing, 2002)

BrainSuite: An automated cortical surface identification tool. - David W. Shattuck; Richard M. Leahy (Medical Image Anal., 2002)

Editorial. - Richard M. Leahy; Michael F. Insana (IEEE Trans. Medical Imaging, 2002)

Spatiotemporal reconstruction of list mode PET data. - Thomas E. Nichols; Jinyi Qi; Evren Asma; Richard M. Leahy (IEEE Trans. Medical Imaging, 2002)

Spatiotemporal Localization of Significant Activation in MEG Using Permutation Tests. - Dimitrios Pantazis; Thomas E. Nichols; Sylvain Baillet; Richard M. Leahy (IPMI, 2003)

Electromagnetic Brain Mapping using BrainStorm. - Sylvain Baillet; John C. Mosher; Richard M. Leahy (ISBI, 2004)

Cortical Surface Parameterization by P-Harmonic Energy Minimization. - Anand A. Joshi; Richard M. Leahy; Paul M. Thompson; David W. Shattuck (ISBI, 2004)

A Fast Fully 4D Incremental Gradient Reconstruction Algorithm for List Mode PET Data. - Quanzheng Li; Evren Asma; Richard M. Leahy (ISBI, 2004)

Statistical Surface-Based Morphometry Using a Non-Parametric Approach. - Dimitrios Pantazis; Richard M. Leahy; Thomas E. Nichols; Martin Styner (ISBI, 2004)

Localization of realistic cortical activity in MEG using current multipoles. - Karim Jerbi; Sylvain Baillet; John C. Mosher; G. Nolte; Line Garnero; Richard M. Leahy (NeuroImage, 2004)

Accurate estimation of the fisher information matrix for the PET image reconstruction problem. - Quanzheng Li; Evren Asma; Jinyi Qi; James R. Bading; Richard M. Leahy (IEEE Trans. Medical Imaging, 2004)

Imaging of oscillatory behavior in event-related MEG studies. - Dimitrios Pantazis; Darren L. Weber; Corby L. Dale; Thomas E. Nichols; Gregory V. Simpson; Richard M. Leahy (Computational Imaging, 2005)

A Framework for Registration, Statistical Characterization and Classification of Cortically Constrained Functional Imaging Data. - Anand A. Joshi; David W. Shattuck; Paul M. Thompson; Richard M. Leahy (IPMI, 2005)

Investigations of dipole localization accuracy in MEG using the bootstrap. - Felix Darvas; M. Rautiainen; Dimitrios Pantazis; Sylvain Baillet; Habib Benali; John C. Mosher; Line Garnero; Richard M. Leahy (NeuroImage, 2005)

A comparison of random field theory and permutation methods for the statistical analysis of MEG data. - Dimitrios Pantazis; Thomas E. Nichols; Sylvain Baillet; Richard M. Leahy (NeuroImage, 2005)

Spatial resolution properties of nonquadratically regularized image reconstruction for PET. - Sangtae Ahn; Richard M. Leahy (ISBI, 2006)

Linearly constrained MEG beamformers for MVAR modeling of cortical interactions. - Hua Brian Hui; Richard M. Leahy (ISBI, 2006)

Statistical modeling and reconstruction of randoms pre-corrected PET data. - Quanzheng Li; Richard M. Leahy (ISBI, 2006)

Matched subspace detection for dynamic PET: an ROC phantom study for MAP reconstruction. - Zheng Li; Quanzheng Li; Xiaoli Yu; Peter S. Conti; Richard M. Leahy (ISBI, 2006)

Task-based comparison of inverse methods in magnetoencephalography. - Esen Küçükaltun-Yildirim; Dimitrios Pantazis; Richard M. Leahy (IEEE Trans. Biomed. Eng., 2006)

Mean and covariance properties of dynamic PET reconstructions from list-mode data. - Evren Asma; Richard M. Leahy (IEEE Trans. Medical Imaging, 2006)

Statistical Modeling and Reconstruction of Randoms Precorrected PET Data. - Quanzheng Li; Richard M. Leahy (IEEE Trans. Medical Imaging, 2006)

Simultaneous surface and volumetric registration using harmonic maps. - Anand A. Joshi; David W. Shattuck; Paul M. Thompson; Richard M. Leahy (Computational Imaging, 2007)

Brain Image Registration Using Cortically Constrained Harmonic Mappings. - Anand A. Joshi; David W. Shattuck; Paul M. Thompson; Richard M. Leahy (IPMI, 2007)

Fast Image Reconstruction Methods for Fully 3d Multispectral Optical Bioluminescence Tomography. - Sangtae Ahn; Abhijit J. Chaudhari; Felix Darvas; Charles A. Bouman; Richard M. Leahy (ISBI, 2007)

A Finite Element Method for Elastic Parameterization and Alignment of Cortical Surfaces Using Sulcal Constraints. - Anand A. Joshi; David W. Shattuck; Paul M. Thompson; Richard M. Leahy (ISBI, 2007)

Variance Approximation for Exponential Family Penalized Maximum Likelihood Estimators: Application fo Kinetic Parametric Estimation. - Quanzheng Li; Richard M. Leahy (ISBI, 2007)

Exploring Human Visual Attention in an Meg Study of a Spatial Cueing Paradigm Using a Novel Ancova Design. - Dimitrios Pantazis; Gregory V. Simpson; Darren L. Weber; Corby L. Dale; Thomas E. Nichols; Richard M. Leahy (ISBI, 2007)

Pet Image Reconstruction Using Anatomical Information Through Mutual Information Based Priors: A Scale Space Approach. - Sangeetha Somayajula; Anand Rangarajan 001; Richard M. Leahy (ISBI, 2007)

Generalized Surface Flows for Deformable Registration and Cortical Matching. - Ilya Eckstein; Anand A. Joshi; C.-C. Jay Kuo; Richard M. Leahy; Mathieu Desbrun (MICCAI (1), 2007)

Iterative Image Reconstruction Using Inverse Fourier Rebinning for Fully 3-D PET. - Sanghee Cho; Quanzheng Li; Sangtae Ahn; Bing Bai; Richard M. Leahy (IEEE Trans. Medical Imaging, 2007)

Surface-Constrained Volumetric Brain Registration Using Harmonic Mappings. - Anand A. Joshi; David W. Shattuck; Paul M. Thompson; Richard M. Leahy (IEEE Trans. Medical Imaging, 2007)

A Fast Fully 4-D Incremental Gradient Reconstruction Algorithm for List Mode PET Data. - Quanzheng Li; Evren Asma; Sangtae Ahn; Richard M. Leahy (IEEE Trans. Medical Imaging, 2007)

A two-step imaging procedure for MEG characterization of cortical currents: Location and spatial extent. - Sheraz Khan 002; Benoit Cottereau; Richard M. Leahy; John C. Mosher; Habib Ammari; Sylvain Baillet (ISBI, 2008)

Mutual information based non-rigidmouse registration using a scale-space approach. - Sangeetha Somayajula; Anand A. Joshi; Richard M. Leahy (ISBI, 2008)

Analysis of Resolution and Noise Properties of Nonquadratically Regularized Image Reconstruction Methods for PET. - Sangtae Ahn; Richard M. Leahy (IEEE Trans. Medical Imaging, 2008)

Optimization of landmark selection for cortical surface registration. - Anand A. Joshi; David W. Shattuck; Dimitrios Pantazis; Quanzheng Li; Hanna Damasio; Richard M. Leahy (CVPR, 2009)

A Framework for Brain Registration via Simultaneous Surface and Volume Flow. - Anand A. Joshi; Richard M. Leahy; Arthur W. Toga; David W. Shattuck (IPMI, 2009)

Optimal Illumination Patterns for Fluorescence Tomography. - Joyita Dutta; Sangtae Ahn; Anand A. Joshi; Richard M. Leahy (ISBI, 2009)

Posture Matching and Elastic Registration of a Mouse Atlas to Surface Topography Range Data. - Anand A. Joshi; Abhijit J. Chaudhari; Changqing Li; David W. Shattuck; Joyita Dutta; Richard M. Leahy; Arthur W. Toga (ISBI, 2009)

Direct Estimation of Patlak Parameters from List Mode PET Data. - Quanzheng Li; Richard M. Leahy (ISBI, 2009)

Generalized Sidelobe Canceller for Magnetoencephalography Arrays. - John C. Mosher; Matti Hämäläinen; Dimitrios Pantazis; Hua Brian Hui; Richard C. Burgess; Richard M. Leahy (ISBI, 2009)

Diffusion Optical Tomography Using Entropic Priors. - Christos Panagiotou; Sangeetha Somayajula; Adam P. Gibson; Martin Schweiger; Richard M. Leahy; Simon R. Arridge (ISBI, 2009)

A novel ANCOVA design for analysis of MEG data with application to a visual attention study. - Dimitrios Pantazis; Gregory V. Simpson; Darren L. Weber; Corby L. Dale; Thomas E. Nichols; Richard M. Leahy (NeuroImage, 2009)

Directed Mammalian Gene Regulatory Networks Using Expression and Comparative Genomic Hybridization Microarray Data from Radiation Hybrids. - Sangtae Ahn; Richard T. Wang; Christopher C. Park; Andy Lin; Richard M. Leahy; Kenneth Lange; Desmond J. Smith (PLoS Comput. Biol., 2009)

A Parameterization-Based Numerical Method for Isotropic and Anisotropic Diffusion Smoothing on Non-Flat Surfaces. - Anand A. Joshi; David W. Shattuck; Paul M. Thompson; Richard M. Leahy (IEEE Trans. Image Process., 2009)

Controlling Familywise Error Rate for Matched Subspace Detection in Dynamic FDG PET. - Zheng Li; Quanzheng Li; Dimitrios Pantazis; Xiaoli Yu; Peter S. Conti; Richard M. Leahy (IEEE Trans. Medical Imaging, 2009)

Lesion Detection in Dynamic FDG-PET Using Matched Subspace Detection. - Zheng Li; Quanzheng Li; Xiaoli Yu; Peter S. Conti; Richard M. Leahy (IEEE Trans. Medical Imaging, 2009)

Statistically optimal graph partition method based on modularity. - Yu-Teng Chang; Dimitrios Pantazis; Hua Brian Hui; Richard M. Leahy (ISBI, 2010)

Anatomical structural network analysis of human brain using partial correlations of gray matter volumes. - Anand A. Joshi; Shantanu H. Joshi; Ivo D. Dinov; David W. Shattuck; Richard M. Leahy; Arthur W. Toga (ISBI, 2010)

Canonical correlation analysis applied to functional connectivity in MEG. - Juan L. P. Soto; Dimitrios Pantazis; Karim Jerbi; Sylvain Bailler; Richard M. Leahy (ISBI, 2010)

A new combined surface and volume registration. - Natasha Leporé; Anand A. Joshi; Richard M. Leahy; Caroline C. Brun; Yi-Yu Chou; Xavier Pennec; Agatha D. Lee; Marina Barysheva; Greig I. de Zubicaray; Margaret J. Wright; Katie L. McMahon; Arthur W. Toga; et al. (Image Processing, 2010)

Identifying true cortical interactions in MEG using the nulling beamformer. - Hua Brian Hui; Dimitrios Pantazis; Steven L. Bressler; Richard M. Leahy (NeuroImage, 2010)

Sulcal set optimization for cortical surface registration. - Anand A. Joshi; Dimitrios Pantazis; Quanzheng Li; Hanna Damasio; David W. Shattuck; Arthur W. Toga; Richard M. Leahy (NeuroImage, 2010)

Comparison of landmark-based and automatic methods for cortical surface registration. - Dimitrios Pantazis; Anand A. Joshi; Jintao Jiang; David W. Shattuck; Lynne E. Bernstein; Hanna Damasio; Richard M. Leahy (NeuroImage, 2010)

Partitioning directed graphs based on modularity and information flow. - Yu-Teng Chang; Dimitrios Pantazis; Richard M. Leahy (ISBI, 2011)

Structural analysis of the cerebral cortex using blind source separation. - David Wheland; Dimitrios Pantazis; Richard M. Leahy (ISBI, 2011)

Brainstorm: A User-Friendly Application for MEG/EEG Analysis. - François Tadel; Sylvain Baillet; John C. Mosher; Dimitrios Pantazis; Richard M. Leahy (Comput. Intell. Neurosci., 2011)

Optimal Rebinning of Time-of-Flight PET Data. - Sangtae Ahn; Sanghee Cho; Quanzheng Li; Yanguang Lin; Richard M. Leahy (IEEE Trans. Medical Imaging, 2011)

PET Image Reconstruction Using Information Theoretic Anatomical Priors. - Sangeetha Somayajula; Christos Panagiotou; Anand Rangarajan 001; Quanzheng Li; Simon R. Arridge; Richard M. Leahy (IEEE Trans. Medical Imaging, 2011)

Correcting susceptibility-induced distortion in diffusion-weighted MRI using constrained nonrigid registration. - Chitresh Bhushan; Justin P. Haldar; Anand A. Joshi; Richard M. Leahy (APSIPA, 2012)

Canonical Granger causality applied to functional brain data. - Syed Ashrafulla; Justin P. Haldar; Anand A. Joshi; Richard M. Leahy (ISBI, 2012)

Phase synchrony in multivariate Gaussian data with applications to cortical networks. - Sergül Aydöre; Dimitrios Pantazis; Richard M. Leahy (ISBI, 2012)

Assessing statistical significance when partitioning large-scale brain networks. - Yu-Teng Chang; Dimitrios Pantazis; Richard M. Leahy (ISBI, 2012)

New linear transforms for data on a Fourier 2-sphere with application to diffusion MRI. - Justin P. Haldar; Richard M. Leahy (ISBI, 2012)

Geodesic curvature flow on surfaces for automatic sulcal delineation. - Anand A. Joshi; David W. Shattuck; Hanna Damasio; Richard M. Leahy (ISBI, 2012)

Constrained mixture modeling for the estimation of kinetic parameters in dynamic PET. - Yanguang Lin; Quanzheng Li; Justin P. Haldar; Richard M. Leahy (ISBI, 2012)

Robust identification of partial-correlation based networks with applications to cortical thickness data. - David Wheland; Anand A. Joshi; Katie McMahon; Narelle K. Hansell; Nicholas G. Martin; Margaret J. Wright; Paul M. Thompson; David W. Shattuck; Richard M. Leahy (ISBI, 2012)

Dual-time-point Patlak estimation from list mode PET data. - Wentao Zhu 002; Quanzheng Li; Richard M. Leahy (ISBI, 2012)

An Invariant Shape Representation Using the Anisotropic Helmholtz Equation. - Anand A. Joshi; Syed Ashrafulla; David W. Shattuck; Hanna Damasio; Richard M. Leahy (MICCAI (3), 2012)

Of the largest eigenvalue for modularity-based partitioning. - Yu-Teng Chang; Dimitrios Pantazis; Richard M. Leahy (SSP, 2012)

A Method for Automated Cortical Surface Registration and Labeling. - Anand A. Joshi; David W. Shattuck; Richard M. Leahy (WBIR, 2012)

Non-rigid Image Registration Using Gaussian Mixture Models. - Sangeetha Somayajula; Anand A. Joshi; Richard M. Leahy (WBIR, 2012)

Causality in variance in electrophysiological data using the ARCH model. - Syed Ashrafulla; Justin P. Haldar; John C. Mosher; Richard M. Leahy (ACSSC, 2013)

A measure of connectivity in the presence of crosstalk. - Sergül Aydöre; Syed Ashrafulla; Anand A. Joshi; Richard M. Leahy (ACSSC, 2013)

Parametric distributions for assessing significance in modular partitions of brain networks. - Yu-Teng Chang; Richard M. Leahy; Dimitrios Pantazis (ISBI, 2013)

The equivalence of linear spherical deconvolution and model-free linear transform methods for diffusion MRI. - Justin P. Haldar; Richard M. Leahy (ISBI, 2013)

Morphometry for early monitoring of treatment response in rheumatoid arthritis. - Anand A. Joshi; Richard M. Leahy; Ramsey Derek Badawi; Abhijit J. Chaudhari (ISBI, 2013)

Canonical granger causality between regions of interest. - Syed Ashrafulla; Justin P. Haldar; Anand A. Joshi; Richard M. Leahy (NeuroImage, 2013)

A note on the phase locking value and its properties. - Sergül Aydöre; Dimitrios Pantazis; Richard M. Leahy (NeuroImage, 2013)

Linear transforms for Fourier data on the sphere: Application to high angular resolution diffusion MRI of the brain. - Justin P. Haldar; Richard M. Leahy (NeuroImage, 2013)

To cut or not to cut? Assessing the modular structure of brain networks. - Yu-Teng Chang; Dimitrios Pantazis; Richard M. Leahy (NeuroImage, 2014)

Sparsity Constrained Mixture Modeling for the Estimation of Kinetic Parameters in Dynamic PET. - Yanguang Lin; Justin P. Haldar; Quanzheng Li; Peter S. Conti; Richard M. Leahy (IEEE Trans. Medical Imaging, 2014)

Patlak Image Estimation From Dual Time-Point List-Mode PET Data. - Wentao Zhu 002; Quanzheng Li; Bing Bai; Peter S. Conti; Richard M. Leahy (IEEE Trans. Medical Imaging, 2014)

Measuring Asymmetric Interactions in Resting State Brain Networks. - Anand A. Joshi; Ronald Salloum; Chitresh Bhushan; Richard M. Leahy (IPMI, 2015)

Correcting inhomogeneity-induced distortion in FMRI using non-rigid registration. - Micah C. Chambers; Chitresh Bhushan; Justin P. Haldar; Richard M. Leahy; David W. Shattuck (ISBI, 2015)

Direct estimation from list-mode data for reversible tracers using graphical modeling. - Wentao Zhu 002; Ning Guo; Bing Bai; Peter S. Conti; Richard M. Leahy; Quanzheng Li (ISBI, 2015)

Co-registration and distortion correction of diffusion and anatomical images based on inverse contrast normalization. - Chitresh Bhushan; Justin P. Haldar; Soyoung Choi; Anand A. Joshi; David W. Shattuck; Richard M. Leahy (NeuroImage, 2015)

Multi-kernel based nonlinear models for connectivity identification of brain networks. - G. V. Karanikolas; Georgios B. Giannakis; Konstantinos Slavakis; Richard M. Leahy (ICASSP, 2016)

Riemannian Statistical Analysis of Cortical Geometry with Robustness to Partial Homology and Misalignment. - Suyash P. Awate; Richard M. Leahy; Anand A. Joshi (MICCAI (1), 2016)

Registration-Based Morphometry for Shape Analysis of the Bones of the Human Wrist. - Anand A. Joshi; Richard M. Leahy; Ramsey Derek Badawi; Abhijit J. Chaudhari (IEEE Trans. Medical Imaging, 2016)

Robust tensor decomposition of resting brain networks in stereotactic EEG. - Jian Li 033; John C. Mosher; Dileep R. Nair; Jorge Gonzalez-Martinez; Richard M. Leahy (ACSSC, 2017)

Kernel Methods for Riemannian Analysis of Robust Descriptors of the Cerebral Cortex. - Suyash P. Awate; Richard M. Leahy; Anand A. Joshi (IPMI, 2017)

Parameter selection for optimized non-local means filtering of task fMRI. - Jian Li 033; Richard M. Leahy (ISBI, 2017)

BrainSync: An Orthogonal Transformation for Synchronization of fMRI Data Across Subjects. - Anand A. Joshi; Minqi Chong; Richard M. Leahy (MICCAI (1), 2017)

A whole brain atlas with sub-parcellation of cortical gyri using resting fMRI. - Anand A. Joshi; Soyoung Choi; Gaurav Sonkar; Minqi Chong; Jorge Gonzalez-Martinez; Dileep Nair; David W. Shattuck; Hanna Damasio; Richard M. Leahy (Image Processing, 2017)

An algorithm for automatic parameter adjustment for brain extraction in BrainSuite. - Gautham Rajagopal; Anand A. Joshi; Richard M. Leahy (Image Processing, 2017)

Individual parcellation of resting fMRI with a group functional connectivity prior. - Minqi Chong; Chitresh Bhushan; Anand A. Joshi; Soyoung Choi; Justin P. Haldar; David W. Shattuck; R. Nathan Spreng; Richard M. Leahy (NeuroImage, 2017)

Global PDF-based temporal non-local means filtering reveals individual differences in brain connectivity. - Jian Li 033; Soyoung Choi; Anand A. Joshi; Jessica L. Wisnowski; Richard M. Leahy (ISBI, 2018)

Using the Anisotropic Laplace Equation to Compute Cortical Thickness. - Anand A. Joshi; Chitresh Bhushan; Ronald Salloum; Jessica L. Wisnowski; David W. Shattuck; Richard M. Leahy (MICCAI (3), 2018)

rfDemons: Resting fMRI-Based Cortical Surface Registration Using the BrainSync Transform. - Anand A. Joshi; Jian Li 033; Minqi Chong; Haleh Akrami; Richard M. Leahy (MICCAI (3), 2018)

Are you thinking what I'm thinking? Synchronization of resting fMRI time-series across subjects. - Anand A. Joshi; Minqi Chong; Jian Li 033; Soyoung Choi; Richard M. Leahy (NeuroImage, 2018)

EEG for Current With Two-Dimensional Support. - George Dassios; Athanassios S. Fokas; Parham Hashemzadeh; Richard M. Leahy (IEEE Trans. Biomed. Eng., 2018)

Low-Rank Modeling of Local Sinogram Neighborhoods with Tomographic Applications. - Rodrigo A. Lobos; Richard M. Leahy; Justin P. Haldar (ACSSC, 2019)

A Matched Filter Decomposition of fMRI into Resting and Task Components. - Anand A. Joshi; Haleh Akrami; Jian Li 033; Richard M. Leahy (MICCAI (3), 2019)

Group-wise alignment of resting fMRI in space and time. - Haleh Akrami; Anand A. Joshi; Jian Li 033; Richard M. Leahy (Image Processing, 2019)

Predicting cognitive scores from resting fMRI data and geometric features of the brain. - Anand A. Joshi; Jian Li 033; Haleh Akrami; Richard M. Leahy (Image Processing, 2019)

Brain network identification in asynchronous task fMRI data using robust and scalable tensor decomposition. - Jian Li 033; Jessica L. Wisnowski; Anand A. Joshi; Richard M. Leahy (Image Processing, 2019)

Robust Variational Autoencoder. - Haleh Akrami; Anand A. Joshi; Jian Li 033; Richard M. Leahy (CoRR, 2019)

Scalable and Robust Tensor Decomposition of Spontaneous Stereotactic EEG Data. - Jian Li 033; Justin P. Haldar; John C. Mosher; Dileep R. Nair; Jorge A. Gonzalez-Martinez; Richard M. Leahy (IEEE Trans. Biomed. Eng., 2019)

3D Phase Retrieval at Nano-Scale via Accelerated Wirtinger Flow. - Zalan Fabian; Justin P. Haldar; Richard M. Leahy; Mahdi Soltanolkotabi (EUSIPCO, 2020)

Brain Lesion Detection Using A Robust Variational Autoencoder and Transfer Learning. - Haleh Akrami; Anand A. Joshi; Jian Li 033; Sergül Aydöre; Richard M. Leahy (ISBI, 2020)

A Network-Based Approach to Study of Adhd Using Tensor Decomposition of Resting State Fmri Data. - Jian Li 033; Anand A. Joshi; Richard M. Leahy (ISBI, 2020)

Autoregression and Structured Low-Rank Modeling of Sinograms. - Rodrigo A. Lobos; Richard M. Leahy; Justin P. Haldar (ISBI, 2020)

Robust Variational Autoencoder for Tabular Data with Beta Divergence. - Haleh Akrami; Sergül Aydöre; Richard M. Leahy; Anand A. Joshi (CoRR, 2020)

Addressing Variance Shrinkage in Variational Autoencoders using Quantile Regression. - Haleh Akrami; Anand A. Joshi; Sergül Aydöre; Richard M. Leahy (CoRR, 2020)

Realistic head modeling of electromagnetic brain activity: An integrated Brainstorm pipeline from MRI data to the FEM solution. - Takfarinas Medani; Juan Garcia-Prieto; François Tadel; Sophie Schrader; Anand A. Joshi; Christian Engwer; Carsten H. Wolters; John C. Mosher; Richard M. Leahy (CoRR, 2020)

fMRI-Kernel Regression: A Kernel-based Method for Pointwise Statistical Analysis of rs-fMRI for Population Studies. - Anand A. Joshi; Soyoung Choi; Haleh Akrami; Richard M. Leahy (CoRR, 2020)

Temporal non-local means filtering for studies of intrinsic brain connectivity from individual resting fMRI. - Jian Li 033; Soyoung Choi; Anand A. Joshi; Jessica L. Wisnowski; Richard M. Leahy (Medical Image Anal., 2020)

Quantile Regression for Uncertainty Estimation in VAEs with Applications to Brain Lesion Detection. - Haleh Akrami; Anand A. Joshi; Sergül Aydöre; Richard M. Leahy (IPMI, 2021)

Prediction of posttraumatic epilepsy using machine learning. - Haleh Akrami; Andrei Irimia; Wenhui Cui; Anand A. Joshi; Richard M. Leahy (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2021)

A pairwise approach for fMRI group studies using the BrainSync Transform. - Anand A. Joshi; Soyoung Choi; Jian Li 033; Haleh Akrami; Richard M. Leahy (Image Processing, 2021)

Deep Quantile Regression for Uncertainty Estimation in Unsupervised and Supervised Lesion Detection. - Haleh Akrami; Anand A. Joshi; Sergül Aydöre; Richard M. Leahy (CoRR, 2021)

Robust brain network identification from multi-subject asynchronous fMRI data. - Jian Li 033; Jessica L. Wisnowski; Anand A. Joshi; Richard M. Leahy (NeuroImage, 2021)

Autoregression and Structured Low-Rank Modeling of Sinogram Neighborhoods. - Rodrigo A. Lobos; Muhammad Usman Ghani 002; W. Clem Karl; Richard M. Leahy; Justin P. Haldar (IEEE Trans. Computational Imaging, 2021)

PET Denoising and Uncertainty Estimation Based on NVAE Model Using Quantile Regression Loss. - Jianan Cui; Yutong Xie 004; Anand A. Joshi; Kuang Gong; Kyung Sang Kim; Young-Don Son; Jong Hoon Kim; Richard M. Leahy; Huafeng Liu 003; Quanzheng Li (MICCAI (4), 2022)

Semi-supervised Learning using Robust Loss. - Wenhui Cui; Haleh Akrami; Anand A. Joshi; Richard M. Leahy (CoRR, 2022)

Learning from imperfect training data using a robust loss function: application to brain image segmentation. - Haleh Akrami; Wenhui Cui; Anand A. Joshi; Richard M. Leahy (CoRR, 2022)

Toward Improved Generalization: Meta Transfer of Self-supervised Knowledge on Graphs. - Wenhui Cui; Haleh Akrami; Anand A. Joshi; Richard M. Leahy (CoRR, 2022)

A robust variational autoencoder using beta divergence. - Haleh Akrami; Anand A. Joshi; Jian Li 033; Sergül Aydöre; Richard M. Leahy (Knowl. Based Syst., 2022)

Learning From Positive and Unlabeled Data Using Observer-GAN. - Omar Zamzam; Haleh Akrami; Richard M. Leahy (ICASSP, 2023)

Learning A Disentangling Representation For PU Learning. - Omar Zamzam; Haleh Akrami; Mahdi Soltanolkotabi; Richard M. Leahy (CoRR, 2023)

Neuro-GPT: Developing A Foundation Model for EEG. - Wenhui Cui; Woojae Jeong; Philipp Thölke; Takfarinas Medani; Karim Jerbi; Anand A. Joshi; Richard M. Leahy (CoRR, 2023)

Meta Transfer of Self-Supervised Knowledge: Foundation Model in Action for Post-Traumatic Epilepsy Prediction. - Wenhui Cui; Haleh Akrami; Ganning Zhao; Anand A. Joshi; Richard M. Leahy (CoRR, 2023)

Brainstorm-DUNEuro: An integrated and user-friendly Finite Element Method for modeling electromagnetic brain activity. - Takfarinas Medani; Juan Garcia-Prieto; François Tadel; Marios Antonakakis; Tim Erdbrügger; Malte Hoeltershinken; Wayne Mead; Sophie Schrader; Anand A. Joshi; Christian Engwer; Carsten H. Wolters; John C. Mosher; et al. (NeuroImage, 2023)

Identification of overlapping and interacting networks reveals intrinsic spatiotemporal organization of the human brain. - Jian Li 033; Yijun Liu; Jessica L. Wisnowski; Richard M. Leahy (NeuroImage, 2023)

Tuning Minimum-Norm regularization parameters for optimal MEG connectivity estimation. - Elisabetta Vallarino; Ana-Sofía Hincapié Casas; Karim Jerbi; Richard M. Leahy; Annalisa Pascarella; Alberto Sorrentino; Sara Sommariva (NeuroImage, 2023)

Knowledge-guided EEG Representation Learning. - Aditya Kommineni; Kleanthis Avramidis; Richard M. Leahy; Shrikanth Narayanan (EMBC, 2024)

Beta Quantile Regression for Robust Estimation of Uncertainty in the Presence of Outliers. - Haleh Akrami; Omar Zamzam; Anand A. Joshi; Sergül Aydöre; Richard M. Leahy (ICASSP, 2024)

Neuro-GPT: Towards A Foundation Model For EEG. - Wenhui Cui; Woojae Jeong; Philipp Thölke; Takfarinas Medani; Karim Jerbi; Anand A. Joshi; Richard M. Leahy (ISBI, 2024)

Generalizable Representation Learning for fMRI-based Neurological Disorder Identification. - Wenhui Cui; Haleh Akrami; Anand A. Joshi; Richard M. Leahy (Trans. Mach. Learn. Res., 2025)

Multi-Center Fetal Brain Tissue Annotation (FeTA) Challenge 2022 Results. - Kelly Payette; Céline Steger; Roxane Licandro; Priscille de Dumast; Hongwei Bran Li; Matthew J. Barkovich; Liu Li; Maik Dannecker; Chen Chen 042; Cheng Ouyang; Niccolò McConnell; Alina Dana Miron; et al. (IEEE Trans. Medical Imaging, 2025)

Deep Learning Characterizes Depression and Suicidal Ideation from Eye Movements. - Kleanthis Avramidis; Woojae Jeong; Aditya Kommineni; Sudarsana Reddy Kadiri; Marcus Ma; Colin McDaniel; Myzelle Hughes; Thomas McGee; Elsi Kaiser; Dani Byrd; Assal Habibi; B. Rael Cahn; et al. (CoRR, 2025)

Neural Responses to Affective Sentences Reveal Signatures of Depression. - Aditya Kommineni; Woojae Jeong; Kleanthis Avramidis; Colin McDaniel; Myzelle Hughes; Thomas McGee; Elsi Kaiser; Kristina Lerman; Idan A. Blank; Dani Byrd; Assal Habibi; B. Rael Cahn; et al. (CoRR, 2025)

Modeling and Reversing Brain Lesions Using Diffusion Models. - Omar Zamzam; Haleh Akrami; Anand A. Joshi; Richard M. Leahy (CoRR, 2025)

Decoding Neural Signatures of Semantic Evaluations in Depression and Suicidality. - Woojae Jeong; Aditya Kommineni; Kleanthis Avramidis; Colin McDaniel; Donald Berry; Myzelle Hughes; Thomas McGee; Elsi Kaiser; Dani Byrd; Assal Habibi; B. Rael Cahn; Idan A. Blank; et al. (CoRR, 2025)