StatsDB: platform-agnostic storage and understanding of next generation sequencing run metrics. - Ricardo H. Ramirez-Gonzalez; Richard M. Leggett; Darren Waite; Anil S. Thanki; Nizar Drou; Mario Cáccamo; Robert P. Davey (F1000Research, 2013)

NextClip: an analysis and read preparation tool for Nextera Long Mate Pair libraries. - Richard M. Leggett; Bernardo J. Clavijo; Leah Clissold; Matthew D. Clark; Mario Cáccamo (Bioinform., 2014)

MinION Analysis and Reference Consortium: Phase 1 data release and analysis. - Camilla L. C. Ip; Matthew Loose; John R. Tyson; Mariateresa de Cesare; Bonnie L. Brown; Miten Jain; Richard M. Leggett; David A. Eccles; Vadim Zalunin; John M. Urban; Paolo Piazza; Rory J. Bowden; et al. (F1000Research, 2015)

NanoOK: multi-reference alignment analysis of nanopore sequencing data, quality and error profiles. - Richard M. Leggett; Darren Heavens; Mario Cáccamo; Matthew D. Clark; Robert P. Davey (Bioinform., 2016)

New approaches for metagenome assembly with short reads. - Martin Ayling; Matthew D. Clark; Richard M. Leggett (Briefings Bioinform., 2020)

Alvis: a tool for contig and read ALignment VISualisation and chimera detection. - Samuel Martin; Richard M. Leggett (BMC Bioinform., 2021)

Capturing variation in metagenomic assembly graphs with MetaCortex. - Samuel Martin; Martin Ayling; Livia Patrono; Mario Cáccamo; Pablo Murcia; Richard M. Leggett (Bioinform., 2023)