GrayWulf: Scalable Clustered Architecture for Data Intensive Computing. - Alexander S. Szalay; Gordon Bell; Jan vandenBerg; Alainna Wonders; Randal C. Burns; Dan Fay; Jim Heasley; Tony Hey; María A. Nieto-Santisteban; Ani Thakar; Catharine van Ingen; Richard Wilton (HICSS, 2009)

Arioc: GPU-accelerated alignment of short bisulfite-treated reads. - Richard Wilton; Xin Li 131; Andrew P. Feinberg; Alexander S. Szalay (Bioinform., 2018)

The Terabase Search Engine: a large-scale relational database of short-read sequences. - Richard Wilton; Sarah J. Wheelan; Alexander S. Szalay; Steven L. Salzberg (Bioinform., 2019)

Arioc: High-concurrency short-read alignment on multiple GPUs. - Richard Wilton; Alexander S. Szalay (PLoS Comput. Biol., 2020)

Performance optimization in DNA short-read alignment. - Richard Wilton; Alexander S. Szalay (Bioinform., 2022)

Short-read aligner performance in germline variant identification. - Richard Wilton; Alexander S. Szalay (Bioinform., 2023)

BiocMAP: a Bioconductor-friendly, GPU-accelerated pipeline for bisulfite-sequencing data. - Nicholas J. Eagles; Richard Wilton; Andrew E. Jaffe; Leonardo Collado-Torres (BMC Bioinform., 2023)