PHIRE, a deterministic approach to reveal regulatory elements in bacteriophage genomes. - Rob Lavigne; W. D. Sun; Guido Volckaert (Bioinform., 2004)

SAPPHIRE: a neural network based classifier for σ70 promoter prediction in Pseudomonas. - Lucas Coppens; Rob Lavigne (BMC Bioinform., 2020)

SASpector: analysis of missing genomic regions in draft genomes of prokaryotes. - Cédric Lood; Alejandro Correa Rojo; Deniz Sinar; Emma Verkinderen; Rob Lavigne; Vera van Noort (Bioinform., 2022)

Antibiotic profile classification of Proteus mirabilis using machine learning: An investigation into multidimensional radiomics features. - Amir Khorasani; Sharareh Moghim; Jeroen Wagemans; Rob Lavigne; Arezoo Mirzaei (Comput. Biol. Medicine, 2024)