Parallel pseudospectral electronic structure: II. Localized Møller-Plesset calculations. - Michael D. Beachy; David Chasman; Richard A. Friesner; Robert B. Murphy (J. Comput. Chem., 1998)

A mixed quantum mechanics/molecular mechanics (QM/MM) method for large-scale modeling of chemistry in protein environments. - Robert B. Murphy; Dean M. Philipp; Richard A. Friesner (J. Comput. Chem., 2000)

Development of a polarizable force field for proteins via ab initio quantum chemistry: First generation model and gas phase tests. - George A. Kaminski; Harry A. Stern; Bruce J. Berne; Richard A. Friesner; Yixiang X. Cao; Robert B. Murphy; Ruhong Zhou; Thomas A. Halgren (J. Comput. Chem., 2002)

Integrated Modeling Program, Applied Chemical Theory (IMPACT). - Jay L. Banks; Hege S. Beard; Yixiang X. Cao; Art E. Cho; Wolfgang Damm; Ramy Farid; Anthony K. Felts; Thomas A. Halgren; Daniel T. Mainz; Jon R. Maple; Robert B. Murphy; Dean M. Philipp; et al. (J. Comput. Chem., 2005)

ConfGen: A Conformational Search Method for Efficient Generation of Bioactive Conformers. - K. Shawn Watts; Pranav Dalal; Robert B. Murphy; Woody Sherman; Richard A. Friesner; John C. Shelley (J. Chem. Inf. Model., 2010)

Docking performance of the glide program as evaluated on the Astex and DUD datasets: a complete set of glide SP results and selected results for a new scoring function integrating WaterMap and glide. - Matthew P. Repasky; Robert B. Murphy; Jay L. Banks; Jeremy R. Greenwood; Ivan Tubert-Brohman; Sathesh Bhat; Richard A. Friesner (J. Comput. Aided Mol. Des., 2012)