TRANSWESD: inferring cellular networks with transitive reduction. - Steffen Klamt; Robert J. Flassig; Kai Sundmacher (Bioinform., 2010)

Optimal design of stimulus experiments for robust discrimination of biochemical reaction networks. - Robert J. Flassig; Kai Sundmacher (Bioinform., 2012)

An effective framework for reconstructing gene regulatory networks from genetical genomics data. - Robert J. Flassig; Sandra Heise; Kai Sundmacher; Steffen Klamt (Bioinform., 2013)

Reconstruction of large-scale regulatory networks based on perturbation graphs and transitive reduction: improved methods and their evaluation. - Andrea Pinna 003; Sandra Heise; Robert J. Flassig; Alberto de la Fuente; Steffen Klamt (BMC Syst. Biol., 2013)

Rational selection of experimental readout and intervention sites for reducing uncertainties in computational model predictions. - Robert J. Flassig; Iryna Migal; Esther der Zalm; Liisa K. Rihko-Struckmann; Kai Sundmacher (BMC Bioinform., 2015)

Probabilistic reactor design in the framework of elementary process functions. - Nicolas M. Kaiser; Robert J. Flassig; Kai Sundmacher (Comput. Chem. Eng., 2016)

Efficient simulation of intrinsic, extrinsic and external noise in biochemical systems. - Dennis Pischel; Kai Sundmacher; Robert J. Flassig (Bioinform., 2017)

Quantitative single cell analysis uncovers the life/death decision in CD95 network. - Jörn H. Buchbinder; Dennis Pischel; Kai Sundmacher; Robert J. Flassig; Inna N. Lavrik (PLoS Comput. Biol., 2018)

Reconstruction and analysis of a carbon-core metabolic network for Dunaliella salina. - Melanie Fachet; Carina Witte; Robert J. Flassig; Liisa K. Rihko-Struckmann; Zaid McKie-Krisberg; Jürgen E. W. Polle; Kai Sundmacher (BMC Bioinform., 2020)