Solvated ensemble averaging in the calculation of partial atomic charges. - Maral Basma; S. Sundara; Dilek Çalgan; Tereza Vernali; Robert J. Woods (J. Comput. Chem., 2001)

A hydration study of (1->4) and (1->6) linked alpha-glucans by comparative 10 ns molecular dynamics simulations and 500-MHz NMR. - Francisco Corzana; Mohammed S. Motawia; Catherine Hervé du Penhoat; Serge Pérez; Sarah M. Tschampel; Robert J. Woods; Søren Balling Engelsen (J. Comput. Chem., 2004)

The Amber biomolecular simulation programs. - David A. Case; Thomas E. Cheatham III; Tom Darden; Holger Gohlke; Ray Luo 001; Kenneth M. Merz Jr.; Alexey Onufriev; Carlos Simmerling; Bing Wang; Robert J. Woods (J. Comput. Chem., 2005)

Gaussian induced dipole polarization model. - Dennis M. Elking; Tom Darden; Robert J. Woods (J. Comput. Chem., 2007)

GLYCAM06: A generalizable biomolecular force field. Carbohydrates. - Karl Nicholas Kirschner; Austin B. Yongye; Sarah M. Tschampel; Jorge González-Outeiriño; Charlisa R. Daniels; Bethany Lachele Foley; Robert J. Woods (J. Comput. Chem., 2007)

Importance of ligand conformational energies in carbohydrate docking: Sorting the wheat from the chaff. - Anita K. Nivedha; Spandana Makeneni; Bethany Lachele Foley; Matthew B. Tessier; Robert J. Woods (J. Comput. Chem., 2014)

BFMP: A Method for Discretizing and Visualizing Pyranose Conformations. - Spandana Makeneni; Bethany Lachele Foley; Robert J. Woods (J. Chem. Inf. Model., 2014)

Verbal response time and duration indices of deception in humans interviewed by a computer-generated agent. - Dean A. Pollina; Robert J. Woods; C. David Salyer; T. Grant Leffingwell; Cynthia Cooper; John W. Rohrbaugh (Int. J. Hum. Comput. Stud., 2017)

Applying Pose Clustering and MD Simulations To Eliminate False Positives in Molecular Docking. - Spandana Makeneni; David F. Thieker; Robert J. Woods (J. Chem. Inf. Model., 2018)

Defining the Specificity of Carbohydrate-Protein Interactions by Quantifying Functional Group Contributions. - Amika Sood; Oksana O. Gerlits; Ye Ji; Nicolai V. Bovin; Leighton Coates; Robert J. Woods (J. Chem. Inf. Model., 2018)