How cyanobacteria pose new problems to old methods: challenges in microarray time series analysis. - Robert Lehmann 002; Rainer Machné; Jens Georg; Manuela Benary; Ilka Axmann; Ralf Steuer (BMC Bioinform., 2013)

Flux Balance Analysis of Cyanobacterial Metabolism: The Metabolic Network of Synechocystis sp. PCC 6803. - Henning Knoop; Marianne Gründel; Yvonne Zilliges; Robert Lehmann 002; Sabrina Hoffmann; Wolfgang Lockau; Ralf Steuer (PLoS Comput. Biol., 2013)

LIBRA: an adaptative integrative tool for paired single-cell multi-omics data. - Xabier Martinez de Morentin; Sumeer Ahmad Khan; Robert Lehmann 002; Sally Sisi Qu; Alberto Maillo; Narsis A. Kiani; Felipe Prósper; Jesper Tegnér; David Gomez-Cabrero (Quant. Biol., 2023)

Reusability report: Learning the transcriptional grammar in single-cell RNA-sequencing data using transformers. - Sumeer Ahmad Khan; Alberto Maillo; Vincenzo Lagani; Robert Lehmann 002; Narsis A. Kiani; David Gomez-Cabrero; Jesper Tegnér (Nat. Mac. Intell., 2023)

Interpretable Causal Representation Learning for Biological Data in the Pathway Space. - Jesus de la Fuente Cedeño; Robert Lehmann 002; Carlos Ruiz-Arenas; Jan Voges; Irene Marín-Goñi; Xabier Martinez de Morentin; David Gomez-Cabrero; Idoia Ochoa; Jesper Tegnér; Vincenzo Lagani; Mikel Hernaez (ICLR, 2025)