Voronoi cell: New method for allocation of space among atoms: Elimination of avoidable errors in calculation of atomic volume and density. - Andrean Goede; Robert Preissner; Cornelius Frömmel (J. Comput. Chem., 1997)

Atomic patch similarity as a criterion of evolutionary relationship between proteins. - Christoph Gille; Andrean Goede; Robert Preissner; Cornelius Frömmel (German Conference on Bioinformatics, 1998)

A procedure for superposition of two arbitrary atomic arrangements. - Andrean Goede; Robert Preissner; Cornelius Frömmel (German Conference on Bioinformatics, 1998)

Dictionary of Interfaces in Proteins (DIP). Data Bank of complementary molecular surface patches. - Robert Preissner; Andrean Goede; Cornelius Frömmel (German Conference on Bioinformatics, 1998)

Interfaces of Secondary Structural Elements in Proteins - Evolution of Atomic Substructures -. - Christoph Gille; Andrean Goede; Kristian Rother; Robert Preissner; Cornelius Frömmel (German Conference on Bioinformatics, 1999)

Homonyms and synonyms in the Dictionary of Interfaces in Proteins (DIP). - Robert Preissner; Andrean Goede; Cornelius Frömmel (Bioinform., 1999)

Matching organic libraries with protein-substructures. - Robert Preissner; Andrean Goede; Kristian Rother; F. Osterkamp; U. Koert; Cornelius Frömmel (J. Comput. Aided Mol. Des., 2001)

Accelerating screening of 3D protein data with a graph theoretical approach. - Cornelius Frömmel; Christoph Gille; Andrean Goede; Clemens Gröpl; Stefan Hougardy; Till Nierhoff; Robert Preissner; Martin Thimm (Bioinform., 2003)

Inhomogeneous molecular density: reference packing densities and distribution of cavities within proteins. - Kristian Rother; Robert Preissner; Andrean Goede; Cornelius Frömmel (Bioinform., 2003)

Columba: Multidimensional Data Integration of Protein Annotations. - Kristian Rother; Heiko Müller 001; Silke Trißl; Ina Koch; Thomas Steinke 001; Robert Preissner; Cornelius Frömmel; Ulf Leser (DILS, 2004)

Comparison of 2D Similarity and 3D Superposition. Application to Searching a Conformational Drug Database. - Martin Thimm; Andrean Goede; Stefan Hougardy; Robert Preissner (J. Chem. Inf. Model., 2004)

SuperDrug: a conformational drug database. - Andrean Goede; Mathias Dunkel; Nina Mester; Cornelius Frömmel; Robert Preissner (Bioinform., 2005)

SUPERFICIAL - Surface mapping of proteins via structure-based peptide library design. - Andrean Goede; Ines S. Jaeger; Robert Preissner (BMC Bioinform., 2005)

SuperLigands - a database of ligand structures derived from the Protein Data Bank. - Elke Michalsky; Mathias Dunkel; Andrean Goede; Robert Preissner (BMC Bioinform., 2005)

Columba: an integrated database of proteins, structures, and annotations. - Silke Trißl; Kristian Rother; Heiko Müller 001; Thomas Steinke 001; Ina Koch; Robert Preissner; Cornelius Frömmel; Ulf Leser (BMC Bioinform., 2005)

SuperMimic - Fitting peptide mimetics into protein structures. - Andrean Goede; Elke Michalsky; Ulrike Schmidt 001; Robert Preissner (BMC Bioinform., 2006)

Representation of target-bound drugs by computed conformers: implications for conformational libraries. - Stefan Günther; Christian Senger; Elke Michalsky; Andrean Goede; Robert Preissner (BMC Bioinform., 2006)

A structural keystone for drug design. - Kristian Rother; Mathias Dunkel; Elke Michalsky; Silke Trißl; Andrean Goede; Ulf Leser; Robert Preissner (J. Integr. Bioinform., 2006)

SuperNatural: a searchable database of available natural compounds. - Mathias Dunkel; Melanie Füllbeck; Stefanie Neumann; Robert Preissner (Nucleic Acids Res., 2006)

Cellular Fingerprints: A Novel Concept for the Integration of Experimental Data and Compound-Target-Pathway Relations (Extended Abstract). - Stefan Günther; Stefanie Neumann; Jessica Ahmed; Robert Preissner (BSB, 2007)

SuperHapten: a comprehensive database for small immunogenic compounds. - Stefan Günther; Dorothea Hempel; Mathias Dunkel; Kristian Rother; Robert Preissner (Nucleic Acids Res., 2007)

Superimposé: a 3D structural superposition server. - Raphael A. Bauer; Philip E. Bourne; Arno Formella; Cornelius Frömmel; Christoph Gille; Andrean Goede; Aysam Guerler; Andreas Hoppe; Ernst-Walter Knapp; Thorsten Pöschel; Burghardt Wittig; Valentin Ziegler; et al. (Nucleic Acids Res., 2008)

SuperPred: drug classification and target prediction. - Mathias Dunkel; Stefan Günther; Jessica Ahmed; Burghardt Wittig; Robert Preissner (Nucleic Acids Res., 2008)

SuperTarget and Matador: resources for exploring drug-target relationships. - Stefan Günther; Michael Kuhn 004; Mathias Dunkel; Monica Campillos; Christian Senger; Evangelia Petsalaki; Jessica Ahmed; Eduardo Garcia Urdiales; Andreas Gewiess; Lars Juhl Jensen; Reinhard Schneider 002; Roman Skoblo; et al. (Nucleic Acids Res., 2008)

Fast Structural Alignment of Biomolecules Using a Hash Table, N-Grams and String Descriptors. - Raphael André Bauer; Kristian Rother; Peter Moor; Knut Reinert; Thomas Steinke 001; Janusz M. Bujnicki; Robert Preissner (Algorithms, 2009)

Computer-assisted identification of small-molecule Bcl-2 modulators. - Melanie Füllbeck; Nina Gebhardt; Julia Hossbach; Peter T. Daniel; Robert Preissner (Comput. Biol. Chem., 2009)

SuperSite: dictionary of metabolite and drug binding sites in proteins. - Raphael André Bauer; Stefan Günther; Dominic Jansen; Carolin Heeger; Paul Florian Thaben; Robert Preissner (Nucleic Acids Res., 2009)

SuperScent - a database of flavors and scents. - Mathias Dunkel; Ulrike Schmidt 001; Swantje Struck; Lena Berger; Björn A. Grüning; Julia Hossbach; Ines S. Jaeger; Uta Effmert; Birgit Piechulla; Roger Eriksson; Jette Knudsen; Robert Preissner (Nucleic Acids Res., 2009)

JAIL: a structure-based interface library for macromolecules. - Stefan Günther; Joachim von Eichborn; Patrick May; Robert Preissner (Nucleic Acids Res., 2009)

SuperLooper - a prediction server for the modeling of loops in globular and membrane proteins. - Peter Werner Hildebrand; Andrean Goede; Raphael A. Bauer; Björn A. Grüning; Jochen Ismer; Elke Michalsky; Robert Preissner (Nucleic Acids Res., 2009)

Voronoia: analyzing packing in protein structures. - Kristian Rother; Peter Werner Hildebrand; Andrean Goede; Björn A. Grüning; Robert Preissner (Nucleic Acids Res., 2009)

SuperToxic: a comprehensive database of toxic compounds. - Ulrike Schmidt 001; Swantje Struck; Björn A. Grüning; Julia Hossbach; Ines S. Jaeger; Roza Parol; Ulrike Lindequist; Eberhard Teuscher; Robert Preissner (Nucleic Acids Res., 2009)

SuperCYP: a comprehensive database on Cytochrome P450 enzymes including a tool for analysis of CYP-drug interactions. - Saskia Preissner; Katharina Kroll; Mathias Dunkel; Christian Senger; Gady Goldsobel; Daniel Kuzman; Stefan Günther; Rainer Winnenburg; Michael Schroeder 001; Robert Preissner (Nucleic Acids Res., 2010)

Cobweb: a Java applet for network exploration and visualisation. - Joachim von Eichborn; Philip E. Bourne; Robert Preissner (Bioinform., 2011)

CancerResource: a comprehensive database of cancer-relevant proteins and compound interactions supported by experimental knowledge. - Jessica Ahmed; Thomas Meinel; Mathias Dunkel; Manuela S. Murgueitio; Robert Adams; Corinna Blasse; Andreas Eckert; Saskia Preissner; Robert Preissner (Nucleic Acids Res., 2011)

SuperSweet - a resource on natural and artificial sweetening agents. - Jessica Ahmed; Saskia Preissner; Mathias Dunkel; Catherine L. Worth; Andreas Eckert; Robert Preissner (Nucleic Acids Res., 2011)

FragmentStore - a comprehensive database of fragments linking metabolites, toxic molecules and drugs. - Jessica Ahmed; Catherine L. Worth; Paul Florian Thaben; Christian Matzig; Corinna Blasse; Mathias Dunkel; Robert Preissner (Nucleic Acids Res., 2011)

PROMISCUOUS: a database for network-based drug-repositioning. - Joachim von Eichborn; Manuela S. Murgueitio; Mathias Dunkel; Soeren Koerner; Philip E. Bourne; Robert Preissner (Nucleic Acids Res., 2011)

SDM - a server for predicting effects of mutations on protein stability and malfunction. - Catherine L. Worth; Robert Preissner; Tom L. Blundell (Nucleic Acids Res., 2011)

SuperTarget goes quantitative: update on drug-target interactions. - Nikolai Hecker; Jessica Ahmed; Joachim von Eichborn; Mathias Dunkel; Karel Macha; Andreas Eckert; Michael K. Gilson; Philip E. Bourne; Robert Preissner (Nucleic Acids Res., 2012)

VaccImm: simulating peptide vaccination in cancer therapy. - Joachim von Eichborn; Anna Lena Woelke; Filippo Castiglione; Robert Preissner (BMC Bioinform., 2013)

SynSysNet: integration of experimental data on synaptic protein-protein interactions with drug-target relations. - Joachim von Eichborn; Mathias Dunkel; Björn O. Gohlke; Sarah C. Preissner; Michael F. Hoffmann; Jakob M. J. Bauer; J. Douglas Armstrong; Martin H. Schaefer 001; Miguel A. Andrade-Navarro; Nicolas Le Novère; Michael D. R. Croning; Seth G. N. Grant; et al. (Nucleic Acids Res., 2013)

ProTox: a web server for the in silico prediction of rodent oral toxicity. - Malgorzata N. Drwal; Priyanka Banerjee; Mathias Dunkel; Martin R. Wettig; Robert Preissner (Nucleic Acids Res., 2014)

SuperPain - a resource on pain-relieving compounds targeting ion channels. - Björn O. Gohlke; Robert Preissner; Saskia Preissner (Nucleic Acids Res., 2014)

The Transformer database: biotransformation of xenobiotics. - Michael F. Hoffmann; Sarah C. Preissner; Janette Nickel; Mathias Dunkel; Robert Preissner; Saskia Preissner (Nucleic Acids Res., 2014)

mVOC: a database of microbial volatiles. - Marie Chantal Lemfack; Janette Nickel; Mathias Dunkel; Robert Preissner; Birgit Piechulla (Nucleic Acids Res., 2014)

SuperPred: update on drug classification and target prediction. - Janette Nickel; Björn-Oliver Gohlke; Jevgeni Erehman; Priyanka Banerjee; Wen Wei Rong; Andrean Goede; Mathias Dunkel; Robert Preissner (Nucleic Acids Res., 2014)

2D and 3D similarity landscape analysis identifies PARP as a novel off-target for the drug Vatalanib. - Björn-Oliver Gohlke; Tim Overkamp; Anja Richter; Antje Richter; Peter T. Daniel; Bernd Gillissen; Robert Preissner (BMC Bioinform., 2015)

Super Natural II - a database of natural products. - Priyanka Banerjee; Jevgeni Erehman; Björn-Oliver Gohlke; Thomas Wilhelm 003; Robert Preissner; Mathias Dunkel (Nucleic Acids Res., 2015)

Computational methods for prediction of in vitro effects of new chemical structures. - Priyanka Banerjee; Vishal B. Siramshetty; Malgorzata N. Drwal; Robert Preissner (J. Cheminformatics, 2016)

CancerResource - updated database of cancer-relevant proteins, mutations and interacting drugs. - Björn-Oliver Gohlke; Janette Nickel; Raik Otto; Mathias Dunkel; Robert Preissner (Nucleic Acids Res., 2016)

SL2: an interactive webtool for modeling of missing segments in proteins. - Jochen Ismer; Alexander S. Rose; Johanna K. S. Tiemann; Andrean Goede; Robert Preissner; Peter W. Hildebrand (Nucleic Acids Res., 2016)

WITHDRAWN - a resource for withdrawn and discontinued drugs. - Vishal B. Siramshetty; Janette Nickel; Christian Omieczynski; Björn-Oliver Gohlke; Malgorzata N. Drwal; Robert Preissner (Nucleic Acids Res., 2016)

The Catch-22 of Predicting hERG Blockade Using Publicly Accessible Bioactivity Data. - Vishal B. Siramshetty; Qiaofeng Chen; Prashanth Devarakonda; Robert Preissner (J. Chem. Inf. Model., 2018)

Exploring Activity Profiles of PAINS and Their Structural Context in Target-Ligand Complexes. - Vishal B. Siramshetty; Robert Preissner; Björn-Oliver Gohlke (J. Chem. Inf. Model., 2018)

ProTox-II: a webserver for the prediction of toxicity of chemicals. - Priyanka Banerjee; Andreas Eckert; Anna K. Schrey; Robert Preissner (Nucleic Acids Res., 2018)

mVOC 2.0: a database of microbial volatiles. - Marie Chantal Lemfack; Björn-Oliver Gohlke; Serge M. T. Toguem; Saskia Preissner; Birgit Piechulla; Robert Preissner (Nucleic Acids Res., 2018)

SuperDRUG2: a one stop resource for approved/marketed drugs. - Vishal B. Siramshetty; Andreas Eckert; Björn-Oliver Gohlke; Andrean Goede; Qiaofeng Chen; Prashanth Devarakonda; Saskia Preissner; Robert Preissner (Nucleic Acids Res., 2018)

SuperCYPsPred - a web server for the prediction of cytochrome activity. - Priyanka Banerjee; Mathias Dunkel; Emanuel Kemmler; Robert Preissner (Nucleic Acids Res., 2020)

Translational suppression of SARS-COV-2 ORF8 protein mRNA as a Viable therapeutic target against COVID-19: Computational studies on potential roles of isolated compounds from Clerodendrum volubile leaves. - Ochuko L. Erukainure; Olubunmi Atolani; Aliyu Muhammad; Rahul Ravichandran; Musa M. Abarshi; Sanusi B. Katsayal; Chika I. Chukwuma; Robert Preissner; Priyanka Banerjee; M. Ahmed Mesaik (Comput. Biol. Medicine, 2021)

VirtualTaste: a web server for the prediction of organoleptic properties of chemical compounds. - Franziska Fritz; Robert Preissner; Priyanka Banerjee (Nucleic Acids Res., 2021)

PROMISCUOUS 2.0: a resource for drug-repositioning. - Kathleen Gallo; Andrean Goede; Andreas Eckert; Barbara Moahamed; Robert Preissner; Björn-Oliver Gohlke (Nucleic Acids Res., 2021)

Voronoia 4-ever. - René Staritzbichler; Nikola Ristic; Andrean Goede; Robert Preissner; Peter Werner Hildebrand (Nucleic Acids Res., 2021)

SuperPred 3.0: drug classification and target prediction - a machine learning approach. - Kathleen Gallo; Andrean Goede; Robert Preissner; Björn-Oliver Gohlke (Nucleic Acids Res., 2022)

SuperNatural 3.0 - a database of natural products and natural product-based derivatives. - Kathleen Gallo; Emanuel Kemmler; Andrean Goede; Finnja Becker; Mathias Dunkel; Robert Preissner; Priyanka Banerjee (Nucleic Acids Res., 2023)

An exploration into CTEPH medications: Combining natural language processing, embedding learning, in vitro models, and real-world evidence for drug repurposing. - Daniel Steiert; Corey Wittig; Priyanka Banerjee; Robert Preissner; Robert Szulcek (PLoS Comput. Biol., 2024)