Accelerating the identification of informative reduced representations of proteins with deep learning for graphs. - Federico Errica; Marco Giulini; Davide Bacciu; Roberto Menichetti; Alessio Micheli; Raffaello Potestio (CoRR, 2020)

EXCOGITO, an Extensible Coarse-Graining Toolbox for the Investigation of Biomolecules by Means of Low-Resolution Representations. - Marco Giulini; Raffaele Fiorentini; Luca Tubiana; Raffaello Potestio; Roberto Menichetti (J. Chem. Inf. Model., 2024)

Density of states in neural networks: an in-depth exploration of learning in parameter space. - Margherita Mele; Roberto Menichetti; Alessandro Ingrosso; Raffaello Potestio (Trans. Mach. Learn. Res., 2025)