An Index Data Structure for Searching in Metric Space Databases. - Roberto Uribe; Gonzalo Navarro 001; Ricardo J. Barrientos; Mauricio Marín (International Conference on Computational Science (1), 2006)

Searching and Updating Metric Space Databases Using the Parallel EGNAT. - Mauricio Marín; Roberto Uribe; Ricardo J. Barrientos (International Conference on Computational Science (1), 2007)

Hybrid Index for Metric Space Databases. - Mauricio Marín; Veronica Gil-Costa; Roberto Uribe (ICCS (1), 2008)

Clustering-Based Similarity Search in Metric Spaces with Sparse Spatial Centers. - Nieves R. Brisaboa; Oscar Pedreira; Diego Seco; Roberto Solar; Roberto Uribe (SOFSEM, 2008)

EGNAT: A Fully Dynamic Metric Access Method for Secondary Memory. - Roberto Uribe Paredes; Gonzalo Navarro 001 (SISAP, 2009)

Construction Strategies on Metric Structures for Similarity Search. - Roberto Uribe Paredes; Claudio Márquez; Roberto Solar (CLEI Electron. J., 2009)

A GPU-Based Implementation for Range Queries on Spaghettis Data Structure. - Roberto Uribe Paredes; Pedro Valero-Lara; Enrique Arias 001; José L. Sánchez 002; Diego Cazorla (ICCSA (1), 2011)

Similarity search implementations for multi-core and many-core processors. - Roberto Uribe Paredes; Pedro Valero-Lara; Enrique Arias 001; José L. Sánchez 002; Diego Cazorla (HPCS, 2011)

Fully dynamic metric access methods based on hyperplane partitioning. - Gonzalo Navarro 001; Roberto Uribe Paredes (Inf. Syst., 2011)

Improving the Performance for the Range Search on Metric Spaces Using a Multi-GPU Platform. - Roberto Uribe Paredes; Enrique Arias 001; José L. Sánchez 002; Diego Cazorla; Pedro Valero-Lara (DEXA (2), 2012)

Towards an efficient static scheduling scheme for delivering queries to heterogeneous clusters in the similarity search problem. - Roberto Uribe Paredes; Diego Cazorla; Enrique Arias 001; José L. Sánchez 002 (J. Supercomput., 2014)

An efficiency study of a pivot-based algorithm for similarity search on a heterogeneous platform. - Roberto Uribe Paredes; Enrique Arias 001; Diego Cazorla; José L. Sánchez 002 (J. Supercomput., 2017)

Identification of Immunoglobulin Gene Usage in Immune Repertoires Sequenced by Nanopore Technology. - Roberto Ahumada-García; Jorge González-Puelma; Diego Álvarez-Saravia; Ricardo J. Barrientos; Roberto Uribe Paredes; Xaviera A. López-Cortés; Marcelo A. Navarrete (IWBBIO (1), 2019)

Error Correction in Nanopore Reads for de novo Genomic Assembly. - Jacqueline Aldridge-Águila; Diego Álvarez-Saravia; Marcelo A. Navarrete; Roberto Uribe Paredes (ICCSA (5), 2020)

Exploring Machine Learning Algorithms and Numerical Representations Strategies to Develop Sequence-Based Predictive Models for Protein Networks. - David Medina-Ortiz; Pedro Salinas; Gabriel Cabas-Mora; Fabio Durán-Verdugo; Alvaro Olivera-Nappa; Roberto Uribe Paredes (ICCSA (1), 2023)

Exploring Machine Learning Algorithms and Protein Language Models Strategies to Develop Enzyme Classification Systems. - Diego Fernández; Alvaro Olivera-Nappa; Roberto Uribe Paredes; David Medina-Ortiz (IWBBIO (1), 2023)

RUDEUS: A Machine Learning Classification System to Study DNA-Binding Proteins. - David Medina-Ortiz; Gabriel Cabas-Mora; Iván Moya; Nicole Soto-García; Roberto Uribe Paredes (KDIR, 2024)

Peptide-based drug discovery through artificial intelligence: towards an autonomous design of therapeutic peptides. - Montserrat Goles; Anamaria Sanchez-Daza; Gabriel Cabas-Mora; Lindybeth Sarmiento-Varón; Julieta Sepúlveda-Yañez; Hoda Anvari-Kazemabad; Mehdi D. Davari; Roberto Uribe Paredes; Alvaro Olivera-Nappa; Marcelo A. Navarrete; David Medina-Ortiz (Briefings Bioinform., 2024)

Peptipedia v2.0: a peptide sequence database and user-friendly web platform. A major update. - Gabriel Cabas-Mora; Anamaria Sanchez-Daza; Nicole Soto-García; Valentina Garrido; Diego Álvarez-Saravia; Marcelo A. Navarrete; Lindybeth Sarmiento-Varón; Julieta Sepúlveda-Yañez; Mehdi D. Davari; Frédéric Cadet; Alvaro Olivera-Nappa; Roberto Uribe Paredes; et al. (Database J. Biol. Databases Curation, 2024)