Collection of small subunit (16S- and 16S-like) ribosomal RNA structures. - Robin Ray Gutell (Nucleic Acids Res., 1993)

A compilation of large subunit (23S and 23S-like) ribosomal RNA structures: 1993. - Robin Ray Gutell; Michael W. Gray; Murray N. Schnare (Nucleic Acids Res., 1993)

The Comparative RNA Web (CRW) Site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs. - Jamie J. Cannone; Sankar Subramanian; Murray N. Schnare; James R. Collett; Lisa M. D'Souza; Yushi Du; Brian Feng; Nan Lin; Lakshmi V. Madabusi; Kirsten M. Müller; Nupur Pande; Zhidi Shang; et al. (BMC Bioinform., 2002)

The Comparative RNA Web (CRW) Site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs: Correction. - Jamie J. Cannone; Sankar Subramanian; Murray N. Schnare; James R. Collett; Lisa M. D'Souza; Yushi Du; Brian Feng; Nan Lin; Lakshmi V. Madabusi; Kirsten M. Müller; Nupur Pande; Zhidi Shang; et al. (BMC Bioinform., 2002)

Evaluation of the suitability of free-energy minimization using nearest-neighbor energy parameters for RNA secondary structure prediction. - Kishore J. Doshi; Jamie J. Cannone; Christian W. Cobaugh; Robin Ray Gutell (BMC Bioinform., 2004)

Biclustering as a method for RNA local multiple sequence alignment. - Shu Wang; Robin Ray Gutell; Daniel P. Miranker (Bioinform., 2007)

Covariant Evolutionary Event Analysis for Base Interaction Prediction Using a Relational Database Management System for RNA. - Weijia Xu; Stuart Ozer; Robin Ray Gutell (SSDBM, 2009)

R-PASS: A Fast Structure-Based RNA Sequence Alignment Algorithm. - Yanan Jiang; Weijia Xu; Lee Parnell Thompson; Robin Ray Gutell; Daniel P. Miranker (BIBM, 2011)

RNA2DMap: A Visual Exploration Tool of the Information in RNA's Higher-Order Structure. - Weijia Xu; Ame Wongsa; Jung Lee; Lei Shang; Jamie J. Cannone; Robin Ray Gutell (BIBM, 2011)

rCAD: A Novel Database Schema for the Comparative Analysis of RNA. - Stuart Ozer; Kishore J. Doshi; Weijia Xu; Robin Ray Gutell (eScience, 2011)

An accurate scalable template-based alignment algorithm. - David P. Gardner; Weijia Xu; Daniel P. Miranker; Stuart Ozer; Jamie J. Cannone; Robin Ray Gutell (BIBM, 2012)

Two accurate sequence, structure, and phylogenetic template-based RNA alignment systems. - Lei Shang; David P. Gardner; Weijia Xu; Jamie J. Cannone; Daniel P. Miranker; Stuart Ozer; Robin Ray Gutell (BMC Syst. Biol., 2013)

R3D-2-MSA: the RNA 3D structure-to-multiple sequence alignment server. - Jamie J. Cannone; Blake A. Sweeney; Anton I. Petrov; Robin Ray Gutell; Craig L. Zirbel; Neocles Leontis (Nucleic Acids Res., 2015)

RNAcentral 2021: secondary structure integration, improved sequence search and new member databases. - Blake A. Sweeney; Anton I. Petrov; Carlos Eduardo Ribas; Robert D. Finn; Alex Bateman; Maciej Szymanski; Wojciech M. Karlowski; Stefan E. Seemann; Jan Gorodkin; Jamie J. Cannone; Robin Ray Gutell; Simon Kay; et al. (Nucleic Acids Res., 2021)