GENote v.β: A Web Tool Prototype for Annotation of Unfinished Sequences in Non-model Eukaryotes. - Noé Fernández-Pozo; Darío Guerrero-Fernández; Rocío Bautista; Josefa Gómez-Maldonado; Concepción Avila; Francisco M. Cánovas; M. Gonzalo Claros (JBI, 2010)

AlignMiner: a Web-based tool for detection of divergent regions in multiple sequence alignments of conserved sequences. - Darío Guerrero-Fernández; Rocío Bautista; David P. Villalobos; Francisco R. Cantón; M. Gonzalo Claros (Algorithms Mol. Biol., 2010)

Detecting and correcting mis-assembled reads in contigs. - Hicham Benzekri; Darío Guerrero-Fernández; Rocío Bautista; M. Gonzalo Claros (IWBBIO, 2013)

AutoFlow: an easy way to build workflows. - Pedro Seoane; Rosario Carmona; Rocío Bautista; Darío Guerrero-Fernández; Manuel Gonzalo Claros (IWBBIO, 2014)

DEgenes Hunter - A Self-customised Gene Expression Analysis Workflow for Non-model Organisms. - Isabel González Gayte; Rocío Bautista Moreno; M. Gonzalo Claros (IWBBIO (2), 2015)

Obtaining the Most Accurate de novo Transcriptomes for Non-model Organisms: The Case of Castanea sativa. - Marina Espigares; Pedro Seoane; Rocío Bautista; Julia Quintana; Luis Gómez; M. Gonzalo Claros (IWBBIO (2), 2017)

NearTrans Can Identify Correlated Expression Changes Between Retrotransposons and Surrounding Genes in Human Cancer. - Rafael Larrosa; Macarena Arroyo; Rocío Bautista; Carmen María López-Rodríguez; M. Gonzalo Claros (IWBBIO (1), 2018)

BLASSO: integration of biological knowledge into a regularized linear model. - Daniel Urda; Francisco Aragón; Rocío Bautista; Leonardo Franco; Francisco J. Veredas 001; Manuel Gonzalo Claros; José Manuel Jerez (BMC Syst. Biol., 2018)

Expression Change Correlations Between Transposons and Their Adjacent Genes in Lung Cancers Reveal a Genomic Location Dependence and Highlights Cancer-Significant Genes. - Macarena Arroyo; Rafael Larrosa; M. Gonzalo Claros; Rocío Bautista (IWBBIO (1), 2019)

Micro-Variations from RNA-seq Experiments for Non-model Organisms. - Elena Espinosa; Macarena Arroyo; Rafael Larrosa; Manuel Manchado; M. Gonzalo Claros; Rocío Bautista (IWBBIO, 2020)